Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vopp1Q8R1C3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.6■□□□□ 0.41
Vopp1Q8R1C3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.6■□□□□ 0.41
Vopp1Q8R1C3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vopp1Q8R1C3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Vopp1Q8R1C3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.6■□□□□ 0.41
Vopp1Q8R1C3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Vopp1Q8R1C3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vopp1Q8R1C3 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.6■□□□□ 0.41
Vopp1Q8R1C3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vopp1Q8R1C3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vopp1Q8R1C3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vopp1Q8R1C3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Vopp1Q8R1C3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vopp1Q8R1C3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vopp1Q8R1C3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vopp1Q8R1C3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vopp1Q8R1C3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vopp1Q8R1C3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Vopp1Q8R1C3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vopp1Q8R1C3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vopp1Q8R1C3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vopp1Q8R1C3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vopp1Q8R1C3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vopp1Q8R1C3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.59■□□□□ 0.41
Vopp1Q8R1C3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.59■□□□□ 0.41
Vopp1Q8R1C3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vopp1Q8R1C3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.59■□□□□ 0.41
Vopp1Q8R1C3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vopp1Q8R1C3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vopp1Q8R1C3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vopp1Q8R1C3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.59■□□□□ 0.41
Vopp1Q8R1C3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vopp1Q8R1C3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vopp1Q8R1C3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vopp1Q8R1C3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vopp1Q8R1C3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Vopp1Q8R1C3 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.58■□□□□ 0.41
Vopp1Q8R1C3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.58■□□□□ 0.4
Vopp1Q8R1C3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.58■□□□□ 0.4
Vopp1Q8R1C3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vopp1Q8R1C3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vopp1Q8R1C3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vopp1Q8R1C3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vopp1Q8R1C3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vopp1Q8R1C3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vopp1Q8R1C3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vopp1Q8R1C3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.58■□□□□ 0.4
Vopp1Q8R1C3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vopp1Q8R1C3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vopp1Q8R1C3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vopp1Q8R1C3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vopp1Q8R1C3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vopp1Q8R1C3 Gm12350-201ENSMUST00000121208 462 ntBASIC17.57■□□□□ 0.4
Vopp1Q8R1C3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.57■□□□□ 0.4
Vopp1Q8R1C3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vopp1Q8R1C3 Gm2651-201ENSMUST00000203560 838 ntBASIC17.57■□□□□ 0.4
Vopp1Q8R1C3 Gm6443-201ENSMUST00000203599 874 ntBASIC17.57■□□□□ 0.4
Vopp1Q8R1C3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Vopp1Q8R1C3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vopp1Q8R1C3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.57■□□□□ 0.4
Vopp1Q8R1C3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vopp1Q8R1C3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.57■□□□□ 0.4
Vopp1Q8R1C3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vopp1Q8R1C3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vopp1Q8R1C3 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Gm43514-201ENSMUST00000198852 424 ntBASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vopp1Q8R1C3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vopp1Q8R1C3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vopp1Q8R1C3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Vopp1Q8R1C3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vopp1Q8R1C3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vopp1Q8R1C3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.55■□□□□ 0.4
Vopp1Q8R1C3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vopp1Q8R1C3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vopp1Q8R1C3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vopp1Q8R1C3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vopp1Q8R1C3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vopp1Q8R1C3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vopp1Q8R1C3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms