Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atf7Q8R0S1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atf7Q8R0S1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Atf7Q8R0S1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atf7Q8R0S1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atf7Q8R0S1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atf7Q8R0S1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Atf7Q8R0S1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Gm6433-201ENSMUST00000118634 875 ntBASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
Atf7Q8R0S1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Atf7Q8R0S1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms