Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sf3a1Q8K4Z5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sf3a1Q8K4Z5 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sf3a1Q8K4Z5 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sf3a1Q8K4Z5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sf3a1Q8K4Z5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Sf3a1Q8K4Z5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sf3a1Q8K4Z5 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sf3a1Q8K4Z5 Gm11355-201ENSMUST00000121120 306 ntBASIC20.35■□□□□ 0.85
Sf3a1Q8K4Z5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.35■□□□□ 0.85
Sf3a1Q8K4Z5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Sf3a1Q8K4Z5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sf3a1Q8K4Z5 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sf3a1Q8K4Z5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sf3a1Q8K4Z5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sf3a1Q8K4Z5 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sf3a1Q8K4Z5 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sf3a1Q8K4Z5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Sf3a1Q8K4Z5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sf3a1Q8K4Z5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sf3a1Q8K4Z5 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.34■□□□□ 0.85
Sf3a1Q8K4Z5 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Sf3a1Q8K4Z5 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sf3a1Q8K4Z5 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.34■□□□□ 0.85
Sf3a1Q8K4Z5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Sf3a1Q8K4Z5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Sf3a1Q8K4Z5 Gm11336-201ENSMUST00000118168 334 ntBASIC20.34■□□□□ 0.85
Sf3a1Q8K4Z5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.34■□□□□ 0.85
Sf3a1Q8K4Z5 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.34■□□□□ 0.85
Sf3a1Q8K4Z5 Gm44450-201ENSMUST00000199528 114 ntBASIC20.34■□□□□ 0.85
Sf3a1Q8K4Z5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sf3a1Q8K4Z5 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sf3a1Q8K4Z5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sf3a1Q8K4Z5 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sf3a1Q8K4Z5 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Sf3a1Q8K4Z5 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sf3a1Q8K4Z5 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Sf3a1Q8K4Z5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sf3a1Q8K4Z5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sf3a1Q8K4Z5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sf3a1Q8K4Z5 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sf3a1Q8K4Z5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sf3a1Q8K4Z5 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Sf3a1Q8K4Z5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Sf3a1Q8K4Z5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sf3a1Q8K4Z5 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sf3a1Q8K4Z5 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Sf3a1Q8K4Z5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Sf3a1Q8K4Z5 Gm23634-201ENSMUST00000175071 91 ntBASIC20.33■□□□□ 0.85
Sf3a1Q8K4Z5 Gm7977-201ENSMUST00000193787 748 ntBASIC20.33■□□□□ 0.85
Sf3a1Q8K4Z5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sf3a1Q8K4Z5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sf3a1Q8K4Z5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sf3a1Q8K4Z5 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.33■□□□□ 0.84
Sf3a1Q8K4Z5 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sf3a1Q8K4Z5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sf3a1Q8K4Z5 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Sf3a1Q8K4Z5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sf3a1Q8K4Z5 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sf3a1Q8K4Z5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sf3a1Q8K4Z5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sf3a1Q8K4Z5 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Sf3a1Q8K4Z5 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Sf3a1Q8K4Z5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sf3a1Q8K4Z5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sf3a1Q8K4Z5 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.32■□□□□ 0.84
Sf3a1Q8K4Z5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sf3a1Q8K4Z5 Gm37722-201ENSMUST00000193757 208 ntBASIC20.32■□□□□ 0.84
Sf3a1Q8K4Z5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.32■□□□□ 0.84
Sf3a1Q8K4Z5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sf3a1Q8K4Z5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sf3a1Q8K4Z5 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sf3a1Q8K4Z5 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Sf3a1Q8K4Z5 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sf3a1Q8K4Z5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sf3a1Q8K4Z5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sf3a1Q8K4Z5 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sf3a1Q8K4Z5 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Sf3a1Q8K4Z5 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sf3a1Q8K4Z5 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sf3a1Q8K4Z5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Sf3a1Q8K4Z5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sf3a1Q8K4Z5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sf3a1Q8K4Z5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sf3a1Q8K4Z5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sf3a1Q8K4Z5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sf3a1Q8K4Z5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sf3a1Q8K4Z5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sf3a1Q8K4Z5 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.31■□□□□ 0.84
Sf3a1Q8K4Z5 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sf3a1Q8K4Z5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Sf3a1Q8K4Z5 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sf3a1Q8K4Z5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sf3a1Q8K4Z5 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sf3a1Q8K4Z5 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.3■□□□□ 0.84
Sf3a1Q8K4Z5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sf3a1Q8K4Z5 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sf3a1Q8K4Z5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.3■□□□□ 0.84
Sf3a1Q8K4Z5 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sf3a1Q8K4Z5 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms