Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim68Q8K243 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim68Q8K243 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim68Q8K243 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim68Q8K243 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim68Q8K243 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim68Q8K243 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim68Q8K243 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.03■□□□□ 0.48
Trim68Q8K243 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim68Q8K243 Gm27459-201ENSMUST00000184860 107 ntBASIC18.03■□□□□ 0.48
Trim68Q8K243 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim68Q8K243 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim68Q8K243 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim68Q8K243 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim68Q8K243 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim68Q8K243 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim68Q8K243 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim68Q8K243 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Trim68Q8K243 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trim68Q8K243 Tgds-204ENSMUST00000228543 1594 ntBASIC18.03■□□□□ 0.48
Trim68Q8K243 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim68Q8K243 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim68Q8K243 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim68Q8K243 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim68Q8K243 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim68Q8K243 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim68Q8K243 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Trim68Q8K243 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Trim68Q8K243 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim68Q8K243 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim68Q8K243 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.02■□□□□ 0.48
Trim68Q8K243 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim68Q8K243 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Trim68Q8K243 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim68Q8K243 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim68Q8K243 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Trim68Q8K243 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim68Q8K243 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.02■□□□□ 0.47
Trim68Q8K243 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.01■□□□□ 0.47
Trim68Q8K243 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim68Q8K243 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim68Q8K243 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.01■□□□□ 0.47
Trim68Q8K243 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.01■□□□□ 0.47
Trim68Q8K243 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.01■□□□□ 0.47
Trim68Q8K243 Gm43347-201ENSMUST00000200226 580 ntBASIC18.01■□□□□ 0.47
Trim68Q8K243 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim68Q8K243 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim68Q8K243 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim68Q8K243 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim68Q8K243 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim68Q8K243 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim68Q8K243 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim68Q8K243 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim68Q8K243 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim68Q8K243 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trim68Q8K243 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trim68Q8K243 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18■□□□□ 0.47
Trim68Q8K243 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim68Q8K243 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim68Q8K243 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18■□□□□ 0.47
Trim68Q8K243 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim68Q8K243 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim68Q8K243 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18■□□□□ 0.47
Trim68Q8K243 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim68Q8K243 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trim68Q8K243 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim68Q8K243 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim68Q8K243 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim68Q8K243 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim68Q8K243 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim68Q8K243 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim68Q8K243 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim68Q8K243 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim68Q8K243 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim68Q8K243 Gm15794-201ENSMUST00000120182 631 ntBASIC17.99■□□□□ 0.47
Trim68Q8K243 Gm11452-201ENSMUST00000122376 690 ntBASIC17.99■□□□□ 0.47
Trim68Q8K243 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.99■□□□□ 0.47
Trim68Q8K243 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.99■□□□□ 0.47
Trim68Q8K243 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim68Q8K243 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim68Q8K243 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trim68Q8K243 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim68Q8K243 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim68Q8K243 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim68Q8K243 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Trim68Q8K243 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim68Q8K243 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trim68Q8K243 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim68Q8K243 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim68Q8K243 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim68Q8K243 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.98■□□□□ 0.47
Trim68Q8K243 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim68Q8K243 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim68Q8K243 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.98■□□□□ 0.47
Trim68Q8K243 Gm8969-201ENSMUST00000199694 526 ntBASIC17.98■□□□□ 0.47
Trim68Q8K243 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.98■□□□□ 0.47
Trim68Q8K243 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.98■□□□□ 0.47
Trim68Q8K243 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim68Q8K243 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Trim68Q8K243 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms