Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.78■□□□□ 0.28
Clip4Q8CI96 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.78■□□□□ 0.28
Clip4Q8CI96 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clip4Q8CI96 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clip4Q8CI96 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Clip4Q8CI96 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Clip4Q8CI96 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.77■□□□□ 0.28
Clip4Q8CI96 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clip4Q8CI96 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clip4Q8CI96 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clip4Q8CI96 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clip4Q8CI96 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clip4Q8CI96 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clip4Q8CI96 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clip4Q8CI96 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Clip4Q8CI96 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clip4Q8CI96 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clip4Q8CI96 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Clip4Q8CI96 Gm13216-201ENSMUST00000117145 591 ntBASIC16.77■□□□□ 0.28
Clip4Q8CI96 Gm7638-201ENSMUST00000121348 967 ntBASIC16.77■□□□□ 0.28
Clip4Q8CI96 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clip4Q8CI96 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.77■□□□□ 0.28
Clip4Q8CI96 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clip4Q8CI96 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Clip4Q8CI96 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Clip4Q8CI96 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Clip4Q8CI96 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clip4Q8CI96 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Clip4Q8CI96 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Clip4Q8CI96 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clip4Q8CI96 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clip4Q8CI96 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clip4Q8CI96 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clip4Q8CI96 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clip4Q8CI96 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.77■□□□□ 0.27
Clip4Q8CI96 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Clip4Q8CI96 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.76■□□□□ 0.27
Clip4Q8CI96 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Gm7889-201ENSMUST00000185591 958 ntBASIC16.76■□□□□ 0.27
Clip4Q8CI96 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.76■□□□□ 0.27
Clip4Q8CI96 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.76■□□□□ 0.27
Clip4Q8CI96 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Clip4Q8CI96 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clip4Q8CI96 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clip4Q8CI96 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clip4Q8CI96 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clip4Q8CI96 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clip4Q8CI96 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clip4Q8CI96 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.75■□□□□ 0.27
Clip4Q8CI96 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.75■□□□□ 0.27
Clip4Q8CI96 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Clip4Q8CI96 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clip4Q8CI96 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clip4Q8CI96 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Clip4Q8CI96 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clip4Q8CI96 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clip4Q8CI96 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clip4Q8CI96 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clip4Q8CI96 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clip4Q8CI96 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.74■□□□□ 0.27
Clip4Q8CI96 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clip4Q8CI96 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Clip4Q8CI96 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clip4Q8CI96 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clip4Q8CI96 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clip4Q8CI96 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Clip4Q8CI96 Gm37025-201ENSMUST00000195159 829 ntBASIC16.74■□□□□ 0.27
Clip4Q8CI96 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.74■□□□□ 0.27
Clip4Q8CI96 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clip4Q8CI96 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clip4Q8CI96 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms