Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sox30Q8CGW4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox30Q8CGW4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sox30Q8CGW4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox30Q8CGW4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Sox30Q8CGW4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox30Q8CGW4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Timm23-208ENSMUST00000226683 750 ntBASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Odf3b-204ENSMUST00000227834 930 ntBASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Sox30Q8CGW4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox30Q8CGW4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox30Q8CGW4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox30Q8CGW4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox30Q8CGW4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sox30Q8CGW4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox30Q8CGW4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox30Q8CGW4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox30Q8CGW4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sox30Q8CGW4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sox30Q8CGW4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sox30Q8CGW4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox30Q8CGW4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.16■□□□□ 0.5
Sox30Q8CGW4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.16■□□□□ 0.5
Sox30Q8CGW4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Sox30Q8CGW4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sox30Q8CGW4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox30Q8CGW4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sox30Q8CGW4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox30Q8CGW4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox30Q8CGW4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox30Q8CGW4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox30Q8CGW4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.15■□□□□ 0.5
Sox30Q8CGW4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox30Q8CGW4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox30Q8CGW4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.15■□□□□ 0.5
Sox30Q8CGW4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox30Q8CGW4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.15■□□□□ 0.5
Sox30Q8CGW4 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.15■□□□□ 0.5
Sox30Q8CGW4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.15■□□□□ 0.5
Sox30Q8CGW4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sox30Q8CGW4 Gm18115-201ENSMUST00000221209 621 ntBASIC18.15■□□□□ 0.5
Sox30Q8CGW4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox30Q8CGW4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Sox30Q8CGW4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox30Q8CGW4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Sox30Q8CGW4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox30Q8CGW4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms