Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Rdh1Q8CGV4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh1Q8CGV4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rdh1Q8CGV4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh1Q8CGV4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh1Q8CGV4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.14■□□□□ 0.17
Rdh1Q8CGV4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.14■□□□□ 0.17
Rdh1Q8CGV4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rdh1Q8CGV4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Rdh1Q8CGV4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rdh1Q8CGV4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh1Q8CGV4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh1Q8CGV4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.14■□□□□ 0.17
Rdh1Q8CGV4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh1Q8CGV4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh1Q8CGV4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh1Q8CGV4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Gm10052-201ENSMUST00000168019 960 ntBASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Gm7729-201ENSMUST00000050143 801 ntBASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh1Q8CGV4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rdh1Q8CGV4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rdh1Q8CGV4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.12■□□□□ 0.17
Rdh1Q8CGV4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.12■□□□□ 0.17
Rdh1Q8CGV4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rdh1Q8CGV4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.12■□□□□ 0.17
Rdh1Q8CGV4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rdh1Q8CGV4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.12■□□□□ 0.17
Rdh1Q8CGV4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.12■□□□□ 0.17
Rdh1Q8CGV4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.12■□□□□ 0.17
Rdh1Q8CGV4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rdh1Q8CGV4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Rdh1Q8CGV4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rdh1Q8CGV4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rdh1Q8CGV4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh1Q8CGV4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh1Q8CGV4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh1Q8CGV4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh1Q8CGV4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.11■□□□□ 0.17
Rdh1Q8CGV4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh1Q8CGV4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rdh1Q8CGV4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Rdh1Q8CGV4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh1Q8CGV4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh1Q8CGV4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh1Q8CGV4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh1Q8CGV4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh1Q8CGV4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh1Q8CGV4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rdh1Q8CGV4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh1Q8CGV4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.11■□□□□ 0.17
Rdh1Q8CGV4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh1Q8CGV4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh1Q8CGV4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh1Q8CGV4 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.1■□□□□ 0.17
Rdh1Q8CGV4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh1Q8CGV4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh1Q8CGV4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh1Q8CGV4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh1Q8CGV4 Gm7153-201ENSMUST00000117092 455 ntBASIC16.1■□□□□ 0.17
Rdh1Q8CGV4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh1Q8CGV4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh1Q8CGV4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh1Q8CGV4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh1Q8CGV4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms