Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc2Q8CG48 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc2Q8CG48 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Smc2Q8CG48 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc2Q8CG48 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Smc2Q8CG48 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.03■□□□□ 0.64
Smc2Q8CG48 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smc2Q8CG48 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc2Q8CG48 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Smc2Q8CG48 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc2Q8CG48 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc2Q8CG48 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc2Q8CG48 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Smc2Q8CG48 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc2Q8CG48 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc2Q8CG48 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc2Q8CG48 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc2Q8CG48 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.02■□□□□ 0.64
Smc2Q8CG48 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Smc2Q8CG48 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smc2Q8CG48 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc2Q8CG48 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc2Q8CG48 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smc2Q8CG48 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.02■□□□□ 0.63
Smc2Q8CG48 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smc2Q8CG48 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Smc2Q8CG48 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smc2Q8CG48 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Smc2Q8CG48 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smc2Q8CG48 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smc2Q8CG48 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc2Q8CG48 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc2Q8CG48 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc2Q8CG48 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc2Q8CG48 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc2Q8CG48 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Smc2Q8CG48 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smc2Q8CG48 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Smc2Q8CG48 Gm30025-201ENSMUST00000218555 728 ntBASIC19.01■□□□□ 0.63
Smc2Q8CG48 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc2Q8CG48 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smc2Q8CG48 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc2Q8CG48 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc2Q8CG48 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Smc2Q8CG48 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Smc2Q8CG48 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19■□□□□ 0.63
Smc2Q8CG48 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smc2Q8CG48 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc2Q8CG48 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc2Q8CG48 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Smc2Q8CG48 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc2Q8CG48 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smc2Q8CG48 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smc2Q8CG48 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
Smc2Q8CG48 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smc2Q8CG48 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smc2Q8CG48 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Smc2Q8CG48 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19■□□□□ 0.63
Smc2Q8CG48 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc2Q8CG48 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc2Q8CG48 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smc2Q8CG48 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smc2Q8CG48 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc2Q8CG48 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc2Q8CG48 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Smc2Q8CG48 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc2Q8CG48 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19■□□□□ 0.63
Smc2Q8CG48 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc2Q8CG48 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Smc2Q8CG48 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19■□□□□ 0.63
Smc2Q8CG48 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Smc2Q8CG48 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc2Q8CG48 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc2Q8CG48 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc2Q8CG48 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc2Q8CG48 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc2Q8CG48 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smc2Q8CG48 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc2Q8CG48 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc2Q8CG48 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smc2Q8CG48 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Smc2Q8CG48 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc2Q8CG48 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.99■□□□□ 0.63
Smc2Q8CG48 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.99■□□□□ 0.63
Smc2Q8CG48 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Smc2Q8CG48 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.99■□□□□ 0.63
Smc2Q8CG48 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc2Q8CG48 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Smc2Q8CG48 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.99■□□□□ 0.63
Smc2Q8CG48 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc2Q8CG48 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc2Q8CG48 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Smc2Q8CG48 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc2Q8CG48 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc2Q8CG48 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Smc2Q8CG48 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc2Q8CG48 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc2Q8CG48 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smc2Q8CG48 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc2Q8CG48 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms