Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc4Q8CG47 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Smc4Q8CG47 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.49■□□□□ 0.87
Smc4Q8CG47 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.49■□□□□ 0.87
Smc4Q8CG47 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc4Q8CG47 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc4Q8CG47 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smc4Q8CG47 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc4Q8CG47 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc4Q8CG47 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc4Q8CG47 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc4Q8CG47 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc4Q8CG47 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Smc4Q8CG47 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smc4Q8CG47 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smc4Q8CG47 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc4Q8CG47 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc4Q8CG47 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Smc4Q8CG47 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Smc4Q8CG47 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Smc4Q8CG47 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Smc4Q8CG47 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.48■□□□□ 0.87
Smc4Q8CG47 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Smc4Q8CG47 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc4Q8CG47 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smc4Q8CG47 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc4Q8CG47 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc4Q8CG47 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc4Q8CG47 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc4Q8CG47 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc4Q8CG47 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Smc4Q8CG47 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc4Q8CG47 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smc4Q8CG47 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Smc4Q8CG47 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc4Q8CG47 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc4Q8CG47 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.47■□□□□ 0.87
Smc4Q8CG47 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smc4Q8CG47 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc4Q8CG47 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.47■□□□□ 0.87
Smc4Q8CG47 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc4Q8CG47 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc4Q8CG47 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Smc4Q8CG47 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.47■□□□□ 0.87
Smc4Q8CG47 Gm27741-201ENSMUST00000185060 237 ntBASIC20.47■□□□□ 0.87
Smc4Q8CG47 Gm17971-201ENSMUST00000190239 806 ntBASIC20.47■□□□□ 0.87
Smc4Q8CG47 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc4Q8CG47 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc4Q8CG47 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smc4Q8CG47 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.46■□□□□ 0.87
Smc4Q8CG47 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc4Q8CG47 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smc4Q8CG47 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc4Q8CG47 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Smc4Q8CG47 Gm10052-201ENSMUST00000168019 960 ntBASIC20.46■□□□□ 0.87
Smc4Q8CG47 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.46■□□□□ 0.87
Smc4Q8CG47 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc4Q8CG47 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc4Q8CG47 Gm7729-201ENSMUST00000050143 801 ntBASIC20.46■□□□□ 0.87
Smc4Q8CG47 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc4Q8CG47 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.46■□□□□ 0.87
Smc4Q8CG47 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc4Q8CG47 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc4Q8CG47 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.46■□□□□ 0.87
Smc4Q8CG47 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smc4Q8CG47 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc4Q8CG47 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc4Q8CG47 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Smc4Q8CG47 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.45■□□□□ 0.86
Smc4Q8CG47 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc4Q8CG47 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smc4Q8CG47 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.45■□□□□ 0.86
Smc4Q8CG47 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.45■□□□□ 0.86
Smc4Q8CG47 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smc4Q8CG47 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Smc4Q8CG47 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc4Q8CG47 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc4Q8CG47 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc4Q8CG47 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Smc4Q8CG47 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc4Q8CG47 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smc4Q8CG47 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smc4Q8CG47 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Smc4Q8CG47 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc4Q8CG47 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc4Q8CG47 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.44■□□□□ 0.86
Smc4Q8CG47 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.44■□□□□ 0.86
Smc4Q8CG47 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smc4Q8CG47 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc4Q8CG47 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.44■□□□□ 0.86
Smc4Q8CG47 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.44■□□□□ 0.86
Smc4Q8CG47 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc4Q8CG47 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC20.44■□□□□ 0.86
Smc4Q8CG47 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smc4Q8CG47 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.44■□□□□ 0.86
Smc4Q8CG47 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smc4Q8CG47 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc4Q8CG47 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.43■□□□□ 0.86
Smc4Q8CG47 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smc4Q8CG47 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms