Protein–RNA interactions for Protein: Q8CE47

Slc49a3, Solute carrier family 49 member A3, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc49a3Q8CE47 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.32■□□□□ 0.04
Slc49a3Q8CE47 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc49a3Q8CE47 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc49a3Q8CE47 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.32■□□□□ 0.04
Slc49a3Q8CE47 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc49a3Q8CE47 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.32■□□□□ 0.04
Slc49a3Q8CE47 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc49a3Q8CE47 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.32■□□□□ 0.04
Slc49a3Q8CE47 Gm42569-201ENSMUST00000200539 472 ntBASIC15.32■□□□□ 0.04
Slc49a3Q8CE47 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.32■□□□□ 0.04
Slc49a3Q8CE47 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc49a3Q8CE47 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc49a3Q8CE47 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc49a3Q8CE47 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc49a3Q8CE47 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.32■□□□□ 0.04
Slc49a3Q8CE47 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc49a3Q8CE47 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc49a3Q8CE47 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc49a3Q8CE47 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc49a3Q8CE47 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc49a3Q8CE47 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Gm6211-202ENSMUST00000167849 925 ntBASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Gm42642-201ENSMUST00000200683 355 ntBASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc49a3Q8CE47 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc49a3Q8CE47 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Gm29257-201ENSMUST00000186115 639 ntBASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Slc49a3Q8CE47 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms