Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Gm15794-201ENSMUST00000120182 631 ntBASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf31Q8CCF0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf31Q8CCF0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf31Q8CCF0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf31Q8CCF0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf31Q8CCF0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf31Q8CCF0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf31Q8CCF0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.16■□□□□ 0.5
Prpf31Q8CCF0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf31Q8CCF0 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.16■□□□□ 0.5
Prpf31Q8CCF0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf31Q8CCF0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf31Q8CCF0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf31Q8CCF0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf31Q8CCF0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf31Q8CCF0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.16■□□□□ 0.5
Prpf31Q8CCF0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf31Q8CCF0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf31Q8CCF0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf31Q8CCF0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf31Q8CCF0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Prpf31Q8CCF0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf31Q8CCF0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf31Q8CCF0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf31Q8CCF0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Prpf31Q8CCF0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf31Q8CCF0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf31Q8CCF0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf31Q8CCF0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf31Q8CCF0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Prpf31Q8CCF0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.15■□□□□ 0.5
Prpf31Q8CCF0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Prpf31Q8CCF0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf31Q8CCF0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf31Q8CCF0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Prpf31Q8CCF0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf31Q8CCF0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf31Q8CCF0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf31Q8CCF0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Prpf31Q8CCF0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Prpf31Q8CCF0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms