Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps53Q8CCB4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps53Q8CCB4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps53Q8CCB4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps53Q8CCB4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps53Q8CCB4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps53Q8CCB4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps53Q8CCB4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps53Q8CCB4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vps53Q8CCB4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps53Q8CCB4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vps53Q8CCB4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps53Q8CCB4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vps53Q8CCB4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps53Q8CCB4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps53Q8CCB4 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.36■□□□□ 0.69
Vps53Q8CCB4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.36■□□□□ 0.69
Vps53Q8CCB4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vps53Q8CCB4 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.36■□□□□ 0.69
Vps53Q8CCB4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps53Q8CCB4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps53Q8CCB4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Vps53Q8CCB4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps53Q8CCB4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps53Q8CCB4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.35■□□□□ 0.69
Vps53Q8CCB4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps53Q8CCB4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.35■□□□□ 0.69
Vps53Q8CCB4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps53Q8CCB4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps53Q8CCB4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Vps53Q8CCB4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.35■□□□□ 0.69
Vps53Q8CCB4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vps53Q8CCB4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vps53Q8CCB4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Vps53Q8CCB4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vps53Q8CCB4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Vps53Q8CCB4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps53Q8CCB4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Vps53Q8CCB4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps53Q8CCB4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps53Q8CCB4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.34■□□□□ 0.69
Vps53Q8CCB4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps53Q8CCB4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps53Q8CCB4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.34■□□□□ 0.69
Vps53Q8CCB4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps53Q8CCB4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vps53Q8CCB4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Vps53Q8CCB4 Gm27389-201ENSMUST00000183622 195 ntBASIC19.34■□□□□ 0.69
Vps53Q8CCB4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Vps53Q8CCB4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.34■□□□□ 0.69
Vps53Q8CCB4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps53Q8CCB4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps53Q8CCB4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps53Q8CCB4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps53Q8CCB4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Vps53Q8CCB4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps53Q8CCB4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vps53Q8CCB4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps53Q8CCB4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Vps53Q8CCB4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vps53Q8CCB4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps53Q8CCB4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps53Q8CCB4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps53Q8CCB4 Gm7638-201ENSMUST00000121348 967 ntBASIC19.33■□□□□ 0.68
Vps53Q8CCB4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Vps53Q8CCB4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps53Q8CCB4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Vps53Q8CCB4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps53Q8CCB4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps53Q8CCB4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.33■□□□□ 0.68
Vps53Q8CCB4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.33■□□□□ 0.68
Vps53Q8CCB4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps53Q8CCB4 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.32■□□□□ 0.68
Vps53Q8CCB4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps53Q8CCB4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Vps53Q8CCB4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Vps53Q8CCB4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps53Q8CCB4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps53Q8CCB4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vps53Q8CCB4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps53Q8CCB4 Gm7791-201ENSMUST00000219066 539 ntBASIC19.32■□□□□ 0.68
Vps53Q8CCB4 Gm21559-201ENSMUST00000220638 855 ntBASIC19.32■□□□□ 0.68
Vps53Q8CCB4 Gm8587-201ENSMUST00000076538 843 ntBASIC19.32■□□□□ 0.68
Vps53Q8CCB4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps53Q8CCB4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps53Q8CCB4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps53Q8CCB4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps53Q8CCB4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps53Q8CCB4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vps53Q8CCB4 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Vps53Q8CCB4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps53Q8CCB4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps53Q8CCB4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vps53Q8CCB4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps53Q8CCB4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.31■□□□□ 0.68
Vps53Q8CCB4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps53Q8CCB4 Gm27704-201ENSMUST00000185094 107 ntBASIC19.31■□□□□ 0.68
Vps53Q8CCB4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.31■□□□□ 0.68
Vps53Q8CCB4 Gm5587-201ENSMUST00000206270 674 ntBASIC19.31■□□□□ 0.68
Vps53Q8CCB4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms