Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shisa4Q8CA71 Haglr-201ENSMUST00000100000 2085 ntBASIC19.32■□□□□ 0.68
Shisa4Q8CA71 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa4Q8CA71 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.32■□□□□ 0.68
Shisa4Q8CA71 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa4Q8CA71 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa4Q8CA71 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa4Q8CA71 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa4Q8CA71 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa4Q8CA71 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa4Q8CA71 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Shisa4Q8CA71 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa4Q8CA71 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa4Q8CA71 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.32■□□□□ 0.68
Shisa4Q8CA71 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa4Q8CA71 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.32■□□□□ 0.68
Shisa4Q8CA71 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa4Q8CA71 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Shisa4Q8CA71 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shisa4Q8CA71 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Shisa4Q8CA71 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Shisa4Q8CA71 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shisa4Q8CA71 Gm7153-201ENSMUST00000117092 455 ntBASIC19.31■□□□□ 0.68
Shisa4Q8CA71 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.31■□□□□ 0.68
Shisa4Q8CA71 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.31■□□□□ 0.68
Shisa4Q8CA71 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shisa4Q8CA71 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Shisa4Q8CA71 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shisa4Q8CA71 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Shisa4Q8CA71 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa4Q8CA71 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Shisa4Q8CA71 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa4Q8CA71 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa4Q8CA71 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa4Q8CA71 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Shisa4Q8CA71 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.3■□□□□ 0.68
Shisa4Q8CA71 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa4Q8CA71 Gm27742-201ENSMUST00000184667 60 ntBASIC19.3■□□□□ 0.68
Shisa4Q8CA71 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.3■□□□□ 0.68
Shisa4Q8CA71 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa4Q8CA71 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa4Q8CA71 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa4Q8CA71 Gm5867-201ENSMUST00000063197 592 ntBASIC19.3■□□□□ 0.68
Shisa4Q8CA71 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa4Q8CA71 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa4Q8CA71 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa4Q8CA71 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa4Q8CA71 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Shisa4Q8CA71 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa4Q8CA71 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Shisa4Q8CA71 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa4Q8CA71 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa4Q8CA71 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa4Q8CA71 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa4Q8CA71 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa4Q8CA71 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa4Q8CA71 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa4Q8CA71 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.29■□□□□ 0.68
Shisa4Q8CA71 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa4Q8CA71 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa4Q8CA71 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa4Q8CA71 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa4Q8CA71 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Shisa4Q8CA71 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa4Q8CA71 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa4Q8CA71 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa4Q8CA71 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa4Q8CA71 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa4Q8CA71 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa4Q8CA71 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa4Q8CA71 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Shisa4Q8CA71 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa4Q8CA71 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa4Q8CA71 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa4Q8CA71 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.27■□□□□ 0.68
Shisa4Q8CA71 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa4Q8CA71 Gm36967-201ENSMUST00000193814 266 ntBASIC19.27■□□□□ 0.68
Shisa4Q8CA71 Gm45328-201ENSMUST00000210942 917 ntBASIC19.27■□□□□ 0.68
Shisa4Q8CA71 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.27■□□□□ 0.68
Shisa4Q8CA71 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa4Q8CA71 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa4Q8CA71 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Shisa4Q8CA71 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Shisa4Q8CA71 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Shisa4Q8CA71 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Shisa4Q8CA71 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.27■□□□□ 0.67
Shisa4Q8CA71 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Shisa4Q8CA71 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shisa4Q8CA71 Gm17807-201ENSMUST00000186869 298 ntBASIC19.26■□□□□ 0.67
Shisa4Q8CA71 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shisa4Q8CA71 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shisa4Q8CA71 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shisa4Q8CA71 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Shisa4Q8CA71 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shisa4Q8CA71 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shisa4Q8CA71 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms