Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Uba3Q8C878 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Uba3Q8C878 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Uba3Q8C878 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Uba3Q8C878 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Uba3Q8C878 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.53■□□□□ 0.4
Uba3Q8C878 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Uba3Q8C878 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Uba3Q8C878 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Uba3Q8C878 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Uba3Q8C878 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Uba3Q8C878 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Uba3Q8C878 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Uba3Q8C878 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Uba3Q8C878 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Uba3Q8C878 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Uba3Q8C878 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.52■□□□□ 0.4
Uba3Q8C878 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.52■□□□□ 0.4
Uba3Q8C878 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Uba3Q8C878 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Uba3Q8C878 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Uba3Q8C878 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Uba3Q8C878 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Uba3Q8C878 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Uba3Q8C878 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Uba3Q8C878 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Uba3Q8C878 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Uba3Q8C878 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Uba3Q8C878 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Uba3Q8C878 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Uba3Q8C878 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Uba3Q8C878 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Uba3Q8C878 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Uba3Q8C878 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Uba3Q8C878 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Uba3Q8C878 Gm11355-201ENSMUST00000121120 306 ntBASIC17.51■□□□□ 0.39
Uba3Q8C878 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.51■□□□□ 0.39
Uba3Q8C878 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Uba3Q8C878 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Uba3Q8C878 Gm23634-201ENSMUST00000175071 91 ntBASIC17.51■□□□□ 0.39
Uba3Q8C878 Gm18115-201ENSMUST00000221209 621 ntBASIC17.51■□□□□ 0.39
Uba3Q8C878 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Uba3Q8C878 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Uba3Q8C878 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Uba3Q8C878 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Uba3Q8C878 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Uba3Q8C878 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Gm37722-201ENSMUST00000193757 208 ntBASIC17.5■□□□□ 0.39
Uba3Q8C878 Gm44450-201ENSMUST00000199528 114 ntBASIC17.5■□□□□ 0.39
Uba3Q8C878 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.5■□□□□ 0.39
Uba3Q8C878 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Uba3Q8C878 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Uba3Q8C878 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Uba3Q8C878 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Uba3Q8C878 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Uba3Q8C878 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Uba3Q8C878 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Uba3Q8C878 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Uba3Q8C878 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Uba3Q8C878 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Uba3Q8C878 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Uba3Q8C878 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Uba3Q8C878 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.49■□□□□ 0.39
Uba3Q8C878 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Uba3Q8C878 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Uba3Q8C878 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Uba3Q8C878 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Uba3Q8C878 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Uba3Q8C878 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Uba3Q8C878 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Uba3Q8C878 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Uba3Q8C878 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Uba3Q8C878 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Uba3Q8C878 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Uba3Q8C878 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Uba3Q8C878 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Uba3Q8C878 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Uba3Q8C878 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.48■□□□□ 0.39
Uba3Q8C878 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Uba3Q8C878 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms