Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.92■□□□□ 0.14
Cfap54Q8C6S9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cfap54Q8C6S9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cfap54Q8C6S9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.92■□□□□ 0.14
Cfap54Q8C6S9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cfap54Q8C6S9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cfap54Q8C6S9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cfap54Q8C6S9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.92■□□□□ 0.14
Cfap54Q8C6S9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cfap54Q8C6S9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.92■□□□□ 0.14
Cfap54Q8C6S9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Cfap54Q8C6S9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cfap54Q8C6S9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.92■□□□□ 0.14
Cfap54Q8C6S9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Cfap54Q8C6S9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 Mir3113-201ENSMUST00000175478 76 ntBASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cfap54Q8C6S9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cfap54Q8C6S9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.9■□□□□ 0.14
Cfap54Q8C6S9 Gm5186-201ENSMUST00000218781 920 ntBASIC15.9■□□□□ 0.14
Cfap54Q8C6S9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cfap54Q8C6S9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cfap54Q8C6S9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.9■□□□□ 0.14
Cfap54Q8C6S9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cfap54Q8C6S9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cfap54Q8C6S9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cfap54Q8C6S9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cfap54Q8C6S9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cfap54Q8C6S9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cfap54Q8C6S9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cfap54Q8C6S9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.9■□□□□ 0.14
Cfap54Q8C6S9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cfap54Q8C6S9 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.9■□□□□ 0.14
Cfap54Q8C6S9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Cfap54Q8C6S9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cfap54Q8C6S9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.9■□□□□ 0.14
Cfap54Q8C6S9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cfap54Q8C6S9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Cfap54Q8C6S9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cfap54Q8C6S9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cfap54Q8C6S9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cfap54Q8C6S9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cfap54Q8C6S9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.89■□□□□ 0.13
Cfap54Q8C6S9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cfap54Q8C6S9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cfap54Q8C6S9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cfap54Q8C6S9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cfap54Q8C6S9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cfap54Q8C6S9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.88■□□□□ 0.13
Cfap54Q8C6S9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cfap54Q8C6S9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cfap54Q8C6S9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cfap54Q8C6S9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cfap54Q8C6S9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cfap54Q8C6S9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cfap54Q8C6S9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cfap54Q8C6S9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Cfap54Q8C6S9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cfap54Q8C6S9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cfap54Q8C6S9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cfap54Q8C6S9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cfap54Q8C6S9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cfap54Q8C6S9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.88■□□□□ 0.13
Cfap54Q8C6S9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cfap54Q8C6S9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cfap54Q8C6S9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cfap54Q8C6S9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cfap54Q8C6S9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.87■□□□□ 0.13
Cfap54Q8C6S9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cfap54Q8C6S9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cfap54Q8C6S9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.87■□□□□ 0.13
Cfap54Q8C6S9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Cfap54Q8C6S9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cfap54Q8C6S9 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.87■□□□□ 0.13
Cfap54Q8C6S9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cfap54Q8C6S9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cfap54Q8C6S9 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.87■□□□□ 0.13
Cfap54Q8C6S9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.87■□□□□ 0.13
Cfap54Q8C6S9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.87■□□□□ 0.13
Cfap54Q8C6S9 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.87■□□□□ 0.13
Cfap54Q8C6S9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.87■□□□□ 0.13
Cfap54Q8C6S9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms