Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.35■□□□□ 0.53
Usp20Q8C6M1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp20Q8C6M1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp20Q8C6M1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Usp20Q8C6M1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp20Q8C6M1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Usp20Q8C6M1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp20Q8C6M1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.35■□□□□ 0.53
Usp20Q8C6M1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp20Q8C6M1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.35■□□□□ 0.53
Usp20Q8C6M1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.35■□□□□ 0.53
Usp20Q8C6M1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp20Q8C6M1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp20Q8C6M1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp20Q8C6M1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp20Q8C6M1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp20Q8C6M1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp20Q8C6M1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp20Q8C6M1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp20Q8C6M1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.35■□□□□ 0.53
Usp20Q8C6M1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp20Q8C6M1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Usp20Q8C6M1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Usp20Q8C6M1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp20Q8C6M1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp20Q8C6M1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.33■□□□□ 0.53
Usp20Q8C6M1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp20Q8C6M1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp20Q8C6M1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp20Q8C6M1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp20Q8C6M1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp20Q8C6M1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Usp20Q8C6M1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.33■□□□□ 0.52
Usp20Q8C6M1 Gm27459-201ENSMUST00000184860 107 ntBASIC18.33■□□□□ 0.52
Usp20Q8C6M1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.33■□□□□ 0.52
Usp20Q8C6M1 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.33■□□□□ 0.52
Usp20Q8C6M1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp20Q8C6M1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Usp20Q8C6M1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp20Q8C6M1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp20Q8C6M1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp20Q8C6M1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Usp20Q8C6M1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.33■□□□□ 0.52
Usp20Q8C6M1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.33■□□□□ 0.52
Usp20Q8C6M1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Usp20Q8C6M1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp20Q8C6M1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp20Q8C6M1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp20Q8C6M1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp20Q8C6M1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.32■□□□□ 0.52
Usp20Q8C6M1 Gm43347-201ENSMUST00000200226 580 ntBASIC18.32■□□□□ 0.52
Usp20Q8C6M1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.32■□□□□ 0.52
Usp20Q8C6M1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp20Q8C6M1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.32■□□□□ 0.52
Usp20Q8C6M1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp20Q8C6M1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp20Q8C6M1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp20Q8C6M1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp20Q8C6M1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp20Q8C6M1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp20Q8C6M1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp20Q8C6M1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp20Q8C6M1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp20Q8C6M1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp20Q8C6M1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.32■□□□□ 0.52
Usp20Q8C6M1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp20Q8C6M1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp20Q8C6M1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp20Q8C6M1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp20Q8C6M1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp20Q8C6M1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Usp20Q8C6M1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp20Q8C6M1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp20Q8C6M1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp20Q8C6M1 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.31■□□□□ 0.52
Usp20Q8C6M1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp20Q8C6M1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp20Q8C6M1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms