Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc60Q8C4J0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc60Q8C4J0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc60Q8C4J0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc60Q8C4J0 Gm18421-201ENSMUST00000204122 625 ntBASIC21.22■□□□□ 0.99
Ccdc60Q8C4J0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Ccdc60Q8C4J0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc60Q8C4J0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc60Q8C4J0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc60Q8C4J0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc60Q8C4J0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ccdc60Q8C4J0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc60Q8C4J0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc60Q8C4J0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc60Q8C4J0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc60Q8C4J0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc60Q8C4J0 Gm13216-201ENSMUST00000117145 591 ntBASIC21.21■□□□□ 0.99
Ccdc60Q8C4J0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.21■□□□□ 0.99
Ccdc60Q8C4J0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc60Q8C4J0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc60Q8C4J0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc60Q8C4J0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ccdc60Q8C4J0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc60Q8C4J0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc60Q8C4J0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc60Q8C4J0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ccdc60Q8C4J0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc60Q8C4J0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc60Q8C4J0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC21.2■□□□□ 0.98
Ccdc60Q8C4J0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc60Q8C4J0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.2■□□□□ 0.98
Ccdc60Q8C4J0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc60Q8C4J0 AC122351.1-201ENSMUST00000220467 126 ntBASIC21.2■□□□□ 0.98
Ccdc60Q8C4J0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc60Q8C4J0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc60Q8C4J0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc60Q8C4J0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21.2■□□□□ 0.98
Ccdc60Q8C4J0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Ccdc60Q8C4J0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc60Q8C4J0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc60Q8C4J0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC21.2■□□□□ 0.98
Ccdc60Q8C4J0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc60Q8C4J0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc60Q8C4J0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc60Q8C4J0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc60Q8C4J0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc60Q8C4J0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ccdc60Q8C4J0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ccdc60Q8C4J0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc60Q8C4J0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ccdc60Q8C4J0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc60Q8C4J0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc60Q8C4J0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc60Q8C4J0 Gm11860-201ENSMUST00000122346 1010 ntBASIC21.19■□□□□ 0.98
Ccdc60Q8C4J0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC21.19■□□□□ 0.98
Ccdc60Q8C4J0 Gm6728-201ENSMUST00000178117 1065 ntBASIC21.19■□□□□ 0.98
Ccdc60Q8C4J0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc60Q8C4J0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc60Q8C4J0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc60Q8C4J0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc60Q8C4J0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc60Q8C4J0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc60Q8C4J0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc60Q8C4J0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc60Q8C4J0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc60Q8C4J0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc60Q8C4J0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
Ccdc60Q8C4J0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.18■□□□□ 0.98
Ccdc60Q8C4J0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc60Q8C4J0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccdc60Q8C4J0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc60Q8C4J0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc60Q8C4J0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc60Q8C4J0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc60Q8C4J0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccdc60Q8C4J0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc60Q8C4J0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc60Q8C4J0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc60Q8C4J0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc60Q8C4J0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc60Q8C4J0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc60Q8C4J0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Ccdc60Q8C4J0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc60Q8C4J0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc60Q8C4J0 Gm8258-201ENSMUST00000055593 1449 ntBASIC21.17■□□□□ 0.98
Ccdc60Q8C4J0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Ccdc60Q8C4J0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc60Q8C4J0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc60Q8C4J0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc60Q8C4J0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc60Q8C4J0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ccdc60Q8C4J0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Ccdc60Q8C4J0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc60Q8C4J0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc60Q8C4J0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc60Q8C4J0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms