Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptcd1Q8C2E4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.42■□□□□ 0.86
Ptcd1Q8C2E4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ptcd1Q8C2E4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ptcd1Q8C2E4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptcd1Q8C2E4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ptcd1Q8C2E4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ptcd1Q8C2E4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptcd1Q8C2E4 Gm12350-201ENSMUST00000121208 462 ntBASIC20.42■□□□□ 0.86
Ptcd1Q8C2E4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC20.42■□□□□ 0.86
Ptcd1Q8C2E4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ptcd1Q8C2E4 Gm27867-201ENSMUST00000184778 125 ntBASIC20.42■□□□□ 0.86
Ptcd1Q8C2E4 Gm10060-201ENSMUST00000212002 111 ntBASIC20.42■□□□□ 0.86
Ptcd1Q8C2E4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptcd1Q8C2E4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptcd1Q8C2E4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptcd1Q8C2E4 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.42■□□□□ 0.86
Ptcd1Q8C2E4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ptcd1Q8C2E4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ptcd1Q8C2E4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptcd1Q8C2E4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptcd1Q8C2E4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptcd1Q8C2E4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptcd1Q8C2E4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptcd1Q8C2E4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptcd1Q8C2E4 Gm13312-201ENSMUST00000119631 718 ntBASIC20.41■□□□□ 0.86
Ptcd1Q8C2E4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ptcd1Q8C2E4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.41■□□□□ 0.86
Ptcd1Q8C2E4 Gm5264-201ENSMUST00000190584 848 ntBASIC20.41■□□□□ 0.86
Ptcd1Q8C2E4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20.41■□□□□ 0.86
Ptcd1Q8C2E4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.41■□□□□ 0.86
Ptcd1Q8C2E4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptcd1Q8C2E4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptcd1Q8C2E4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Ptcd1Q8C2E4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptcd1Q8C2E4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptcd1Q8C2E4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ptcd1Q8C2E4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.4■□□□□ 0.86
Ptcd1Q8C2E4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptcd1Q8C2E4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptcd1Q8C2E4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.4■□□□□ 0.86
Ptcd1Q8C2E4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.4■□□□□ 0.86
Ptcd1Q8C2E4 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ptcd1Q8C2E4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptcd1Q8C2E4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Ptcd1Q8C2E4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptcd1Q8C2E4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptcd1Q8C2E4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptcd1Q8C2E4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptcd1Q8C2E4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptcd1Q8C2E4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptcd1Q8C2E4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ptcd1Q8C2E4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptcd1Q8C2E4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ptcd1Q8C2E4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ptcd1Q8C2E4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ptcd1Q8C2E4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
Ptcd1Q8C2E4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ptcd1Q8C2E4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.86
Ptcd1Q8C2E4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Gm27702-201ENSMUST00000184512 56 ntBASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Gm44357-201ENSMUST00000195897 142 ntBASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Gm19658-201ENSMUST00000196231 138 ntBASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Gm44367-201ENSMUST00000196836 138 ntBASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Gm44350-201ENSMUST00000197197 138 ntBASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Gm44390-201ENSMUST00000197533 144 ntBASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Gm44313-201ENSMUST00000198018 138 ntBASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Gm44486-201ENSMUST00000198508 138 ntBASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Gm44454-201ENSMUST00000198541 138 ntBASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Gm44314-201ENSMUST00000199263 138 ntBASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Gm44394-201ENSMUST00000199558 138 ntBASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Gm44484-201ENSMUST00000199873 138 ntBASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Gm44466-201ENSMUST00000200264 138 ntBASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Gm44359-201ENSMUST00000200671 138 ntBASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ptcd1Q8C2E4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ptcd1Q8C2E4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ptcd1Q8C2E4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.38■□□□□ 0.85
Ptcd1Q8C2E4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ptcd1Q8C2E4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ptcd1Q8C2E4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ptcd1Q8C2E4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ptcd1Q8C2E4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.38■□□□□ 0.85
Ptcd1Q8C2E4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.38■□□□□ 0.85
Ptcd1Q8C2E4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Ptcd1Q8C2E4 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.38■□□□□ 0.85
Ptcd1Q8C2E4 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.38■□□□□ 0.85
Ptcd1Q8C2E4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ptcd1Q8C2E4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ptcd1Q8C2E4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ptcd1Q8C2E4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms