Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cps1Q8C196 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cps1Q8C196 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cps1Q8C196 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Cps1Q8C196 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cps1Q8C196 Zcchc6-207ENSMUST00000225576 2499 ntBASIC22.33■■□□□ 1.17
Cps1Q8C196 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Cps1Q8C196 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cps1Q8C196 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cps1Q8C196 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cps1Q8C196 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cps1Q8C196 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Cps1Q8C196 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cps1Q8C196 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cps1Q8C196 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cps1Q8C196 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cps1Q8C196 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC22.32■■□□□ 1.16
Cps1Q8C196 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC22.32■■□□□ 1.16
Cps1Q8C196 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Cps1Q8C196 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC22.32■■□□□ 1.16
Cps1Q8C196 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cps1Q8C196 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC22.32■■□□□ 1.16
Cps1Q8C196 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cps1Q8C196 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Cps1Q8C196 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cps1Q8C196 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cps1Q8C196 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cps1Q8C196 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Cps1Q8C196 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC22.31■■□□□ 1.16
Cps1Q8C196 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC22.31■■□□□ 1.16
Cps1Q8C196 AC117588.1-201ENSMUST00000228510 999 ntBASIC22.31■■□□□ 1.16
Cps1Q8C196 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cps1Q8C196 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cps1Q8C196 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cps1Q8C196 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cps1Q8C196 Gm11873-201ENSMUST00000117877 1304 ntBASIC22.31■■□□□ 1.16
Cps1Q8C196 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cps1Q8C196 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cps1Q8C196 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cps1Q8C196 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cps1Q8C196 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC22.31■■□□□ 1.16
Cps1Q8C196 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Cps1Q8C196 Mir3113-201ENSMUST00000175478 76 ntBASIC22.31■■□□□ 1.16
Cps1Q8C196 AC159106.1-201ENSMUST00000224421 690 ntBASIC22.31■■□□□ 1.16
Cps1Q8C196 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cps1Q8C196 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cps1Q8C196 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Cps1Q8C196 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC22.3■■□□□ 1.16
Cps1Q8C196 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cps1Q8C196 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cps1Q8C196 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cps1Q8C196 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC22.3■■□□□ 1.16
Cps1Q8C196 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC22.3■■□□□ 1.16
Cps1Q8C196 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC22.3■■□□□ 1.16
Cps1Q8C196 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cps1Q8C196 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Cps1Q8C196 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Cps1Q8C196 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cps1Q8C196 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cps1Q8C196 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cps1Q8C196 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cps1Q8C196 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cps1Q8C196 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cps1Q8C196 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC22.29■■□□□ 1.16
Cps1Q8C196 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Cps1Q8C196 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cps1Q8C196 Dmtn-207ENSMUST00000228001 2437 ntBASIC22.29■■□□□ 1.16
Cps1Q8C196 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cps1Q8C196 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cps1Q8C196 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cps1Q8C196 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC22.29■■□□□ 1.16
Cps1Q8C196 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC22.29■■□□□ 1.16
Cps1Q8C196 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC22.29■■□□□ 1.16
Cps1Q8C196 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cps1Q8C196 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cps1Q8C196 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cps1Q8C196 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cps1Q8C196 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC22.28■■□□□ 1.16
Cps1Q8C196 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC22.28■■□□□ 1.16
Cps1Q8C196 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cps1Q8C196 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Cps1Q8C196 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cps1Q8C196 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cps1Q8C196 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cps1Q8C196 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cps1Q8C196 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cps1Q8C196 Gm8784-201ENSMUST00000222096 1435 ntBASIC22.28■■□□□ 1.16
Cps1Q8C196 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cps1Q8C196 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cps1Q8C196 Gm5648-201ENSMUST00000122244 1587 ntBASIC22.27■■□□□ 1.16
Cps1Q8C196 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cps1Q8C196 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cps1Q8C196 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC22.27■■□□□ 1.16
Cps1Q8C196 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cps1Q8C196 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cps1Q8C196 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cps1Q8C196 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cps1Q8C196 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Cps1Q8C196 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC22.26■■□□□ 1.15
Cps1Q8C196 Auts2-212ENSMUST00000178555 309 ntBASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms