Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Gm44450-201ENSMUST00000199528 114 ntBASIC17.16■□□□□ 0.34
Trub1Q8C0D0 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.16■□□□□ 0.34
Trub1Q8C0D0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Mir1668-201ENSMUST00000184114 107 ntBASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trub1Q8C0D0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trub1Q8C0D0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trub1Q8C0D0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms