Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.77■□□□□ 0.12
Cdk5rap1Q8BTW8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdk5rap1Q8BTW8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdk5rap1Q8BTW8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdk5rap1Q8BTW8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdk5rap1Q8BTW8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Cdk5rap1Q8BTW8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdk5rap1Q8BTW8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.77■□□□□ 0.12
Cdk5rap1Q8BTW8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdk5rap1Q8BTW8 Olfr129-201ENSMUST00000122318 993 ntBASIC15.77■□□□□ 0.12
Cdk5rap1Q8BTW8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdk5rap1Q8BTW8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Cdk5rap1Q8BTW8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cdk5rap1Q8BTW8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdk5rap1Q8BTW8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdk5rap1Q8BTW8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdk5rap1Q8BTW8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdk5rap1Q8BTW8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cdk5rap1Q8BTW8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.77■□□□□ 0.11
Cdk5rap1Q8BTW8 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.77■□□□□ 0.11
Cdk5rap1Q8BTW8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdk5rap1Q8BTW8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cdk5rap1Q8BTW8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdk5rap1Q8BTW8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdk5rap1Q8BTW8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdk5rap1Q8BTW8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Gm27741-201ENSMUST00000185060 237 ntBASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Gm17971-201ENSMUST00000190239 806 ntBASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Cdk5rap1Q8BTW8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk5rap1Q8BTW8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms