Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.62■□□□□ 0.41
Rd3Q8BRE0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rd3Q8BRE0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rd3Q8BRE0 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.62■□□□□ 0.41
Rd3Q8BRE0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rd3Q8BRE0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rd3Q8BRE0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Rd3Q8BRE0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.62■□□□□ 0.41
Rd3Q8BRE0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.62■□□□□ 0.41
Rd3Q8BRE0 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.62■□□□□ 0.41
Rd3Q8BRE0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rd3Q8BRE0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rd3Q8BRE0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rd3Q8BRE0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rd3Q8BRE0 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.62■□□□□ 0.41
Rd3Q8BRE0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rd3Q8BRE0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rd3Q8BRE0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rd3Q8BRE0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rd3Q8BRE0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.61■□□□□ 0.41
Rd3Q8BRE0 Gm12644-201ENSMUST00000119935 606 ntBASIC17.61■□□□□ 0.41
Rd3Q8BRE0 Gm6443-201ENSMUST00000203599 874 ntBASIC17.61■□□□□ 0.41
Rd3Q8BRE0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rd3Q8BRE0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.61■□□□□ 0.41
Rd3Q8BRE0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.61■□□□□ 0.41
Rd3Q8BRE0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rd3Q8BRE0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rd3Q8BRE0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.61■□□□□ 0.41
Rd3Q8BRE0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.61■□□□□ 0.41
Rd3Q8BRE0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rd3Q8BRE0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rd3Q8BRE0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rd3Q8BRE0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rd3Q8BRE0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.6■□□□□ 0.41
Rd3Q8BRE0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rd3Q8BRE0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.59■□□□□ 0.41
Rd3Q8BRE0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rd3Q8BRE0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rd3Q8BRE0 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.58■□□□□ 0.41
Rd3Q8BRE0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.58■□□□□ 0.41
Rd3Q8BRE0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rd3Q8BRE0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rd3Q8BRE0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rd3Q8BRE0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rd3Q8BRE0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Rd3Q8BRE0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Rd3Q8BRE0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rd3Q8BRE0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rd3Q8BRE0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rd3Q8BRE0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.58■□□□□ 0.4
Rd3Q8BRE0 Gm43514-201ENSMUST00000198852 424 ntBASIC17.58■□□□□ 0.4
Rd3Q8BRE0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms