Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Gm10231-201ENSMUST00000181584 441 ntBASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Gm10175-202ENSMUST00000208752 441 ntBASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Gm7791-201ENSMUST00000219066 539 ntBASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Cpsf4Q8BQZ5 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Gm27463-201ENSMUST00000183569 57 ntBASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Haglr-201ENSMUST00000100000 2085 ntBASIC16.14■□□□□ 0.17
Cpsf4Q8BQZ5 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4Q8BQZ5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cpsf4Q8BQZ5 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4Q8BQZ5 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4Q8BQZ5 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.13■□□□□ 0.17
Cpsf4Q8BQZ5 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4Q8BQZ5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4Q8BQZ5 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4Q8BQZ5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4Q8BQZ5 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4Q8BQZ5 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4Q8BQZ5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4Q8BQZ5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4Q8BQZ5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cpsf4Q8BQZ5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4Q8BQZ5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4Q8BQZ5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4Q8BQZ5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4Q8BQZ5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.13■□□□□ 0.17
Cpsf4Q8BQZ5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms