Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nop53Q8BK35 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nop53Q8BK35 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nop53Q8BK35 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.84■□□□□ 0.45
Nop53Q8BK35 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.84■□□□□ 0.45
Nop53Q8BK35 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nop53Q8BK35 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Nop53Q8BK35 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nop53Q8BK35 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nop53Q8BK35 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Nop53Q8BK35 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Nop53Q8BK35 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nop53Q8BK35 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nop53Q8BK35 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nop53Q8BK35 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nop53Q8BK35 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nop53Q8BK35 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.83■□□□□ 0.44
Nop53Q8BK35 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nop53Q8BK35 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nop53Q8BK35 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Nop53Q8BK35 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Nop53Q8BK35 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nop53Q8BK35 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nop53Q8BK35 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Nop53Q8BK35 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nop53Q8BK35 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nop53Q8BK35 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nop53Q8BK35 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nop53Q8BK35 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nop53Q8BK35 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.83■□□□□ 0.44
Nop53Q8BK35 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Nop53Q8BK35 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Mir7071-201ENSMUST00000184847 69 ntBASIC17.82■□□□□ 0.44
Nop53Q8BK35 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nop53Q8BK35 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nop53Q8BK35 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.81■□□□□ 0.44
Nop53Q8BK35 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nop53Q8BK35 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nop53Q8BK35 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nop53Q8BK35 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nop53Q8BK35 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.81■□□□□ 0.44
Nop53Q8BK35 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.81■□□□□ 0.44
Nop53Q8BK35 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Nop53Q8BK35 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nop53Q8BK35 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nop53Q8BK35 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nop53Q8BK35 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nop53Q8BK35 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nop53Q8BK35 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nop53Q8BK35 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nop53Q8BK35 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nop53Q8BK35 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nop53Q8BK35 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nop53Q8BK35 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nop53Q8BK35 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nop53Q8BK35 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nop53Q8BK35 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Nop53Q8BK35 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nop53Q8BK35 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.8■□□□□ 0.44
Nop53Q8BK35 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nop53Q8BK35 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nop53Q8BK35 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.8■□□□□ 0.44
Nop53Q8BK35 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nop53Q8BK35 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nop53Q8BK35 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nop53Q8BK35 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nop53Q8BK35 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Nop53Q8BK35 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.8■□□□□ 0.44
Nop53Q8BK35 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nop53Q8BK35 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nop53Q8BK35 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nop53Q8BK35 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nop53Q8BK35 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nop53Q8BK35 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nop53Q8BK35 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.79■□□□□ 0.44
Nop53Q8BK35 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nop53Q8BK35 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.79■□□□□ 0.44
Nop53Q8BK35 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms