Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcal1Q8BJL0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcal1Q8BJL0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcal1Q8BJL0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcal1Q8BJL0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcal1Q8BJL0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcal1Q8BJL0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcal1Q8BJL0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Smarcal1Q8BJL0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.67■□□□□ 0.42
Smarcal1Q8BJL0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.67■□□□□ 0.42
Smarcal1Q8BJL0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.67■□□□□ 0.42
Smarcal1Q8BJL0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Smarcal1Q8BJL0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Smarcal1Q8BJL0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.67■□□□□ 0.42
Smarcal1Q8BJL0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcal1Q8BJL0 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.67■□□□□ 0.42
Smarcal1Q8BJL0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Smarcal1Q8BJL0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcal1Q8BJL0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.67■□□□□ 0.42
Smarcal1Q8BJL0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcal1Q8BJL0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcal1Q8BJL0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcal1Q8BJL0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.66■□□□□ 0.42
Smarcal1Q8BJL0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcal1Q8BJL0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcal1Q8BJL0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.66■□□□□ 0.42
Smarcal1Q8BJL0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.66■□□□□ 0.42
Smarcal1Q8BJL0 Gm2651-201ENSMUST00000203560 838 ntBASIC17.66■□□□□ 0.42
Smarcal1Q8BJL0 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.66■□□□□ 0.42
Smarcal1Q8BJL0 Gm6296-201ENSMUST00000222599 943 ntBASIC17.66■□□□□ 0.42
Smarcal1Q8BJL0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcal1Q8BJL0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcal1Q8BJL0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcal1Q8BJL0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcal1Q8BJL0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcal1Q8BJL0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Smarcal1Q8BJL0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcal1Q8BJL0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcal1Q8BJL0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Smarcal1Q8BJL0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcal1Q8BJL0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcal1Q8BJL0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Smarcal1Q8BJL0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcal1Q8BJL0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Smarcal1Q8BJL0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Smarcal1Q8BJL0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Smarcal1Q8BJL0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcal1Q8BJL0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smarcal1Q8BJL0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smarcal1Q8BJL0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 Gm27867-201ENSMUST00000184778 125 ntBASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.64■□□□□ 0.41
Smarcal1Q8BJL0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcal1Q8BJL0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms