Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Gm33142-201ENSMUST00000193913 867 ntBASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Gm17808-201ENSMUST00000200859 894 ntBASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim23Q8BGX0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim23Q8BGX0 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Gm11950-201ENSMUST00000121615 838 ntBASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim23Q8BGX0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim23Q8BGX0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
Trim23Q8BGX0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim23Q8BGX0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trim23Q8BGX0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim23Q8BGX0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim23Q8BGX0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trim23Q8BGX0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms