Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ubp1Q811S7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.4■□□□□ 0.22
Ubp1Q811S7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ubp1Q811S7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ubp1Q811S7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ubp1Q811S7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ubp1Q811S7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ubp1Q811S7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ubp1Q811S7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ubp1Q811S7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ubp1Q811S7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Ubp1Q811S7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Phf7-203ENSMUST00000226565 1971 ntBASIC16.39■□□□□ 0.21
Ubp1Q811S7 Gm10013-201ENSMUST00000106074 672 ntBASIC16.39■□□□□ 0.21
Ubp1Q811S7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.39■□□□□ 0.21
Ubp1Q811S7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ubp1Q811S7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.39■□□□□ 0.21
Ubp1Q811S7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.39■□□□□ 0.21
Ubp1Q811S7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ubp1Q811S7 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.39■□□□□ 0.21
Ubp1Q811S7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubp1Q811S7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.38■□□□□ 0.21
Ubp1Q811S7 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.38■□□□□ 0.21
Ubp1Q811S7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubp1Q811S7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubp1Q811S7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubp1Q811S7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubp1Q811S7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubp1Q811S7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubp1Q811S7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.38■□□□□ 0.21
Ubp1Q811S7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ubp1Q811S7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubp1Q811S7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubp1Q811S7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubp1Q811S7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Ubp1Q811S7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubp1Q811S7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubp1Q811S7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubp1Q811S7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ubp1Q811S7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ubp1Q811S7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ubp1Q811S7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Gm13186-201ENSMUST00000118031 316 ntBASIC16.36■□□□□ 0.21
Ubp1Q811S7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms