Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Grk6-206ENSMUST00000224995 2971 ntBASIC21.39■■□□□ 1.02
Shank2Q80Z38 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Shank2Q80Z38 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Shank2Q80Z38 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Shank2Q80Z38 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Shank2Q80Z38 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Shank2Q80Z38 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Shank2Q80Z38 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Shank2Q80Z38 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Shank2Q80Z38 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC21.39■■□□□ 1.02
Shank2Q80Z38 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Shank2Q80Z38 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Shank2Q80Z38 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.39■■□□□ 1.01
Shank2Q80Z38 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Shank2Q80Z38 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Shank2Q80Z38 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC21.39■■□□□ 1.01
Shank2Q80Z38 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Shank2Q80Z38 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Shank2Q80Z38 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Shank2Q80Z38 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Shank2Q80Z38 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Shank2Q80Z38 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Shank2Q80Z38 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Shank2Q80Z38 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Shank2Q80Z38 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Shank2Q80Z38 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Shank2Q80Z38 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Shank2Q80Z38 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC21.38■■□□□ 1.01
Shank2Q80Z38 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC21.38■■□□□ 1.01
Shank2Q80Z38 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Shank2Q80Z38 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC21.38■■□□□ 1.01
Shank2Q80Z38 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Shank2Q80Z38 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC21.38■■□□□ 1.01
Shank2Q80Z38 Wdyhv1-206ENSMUST00000227142 786 ntBASIC21.38■■□□□ 1.01
Shank2Q80Z38 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Shank2Q80Z38 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Shank2Q80Z38 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shank2Q80Z38 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shank2Q80Z38 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Shank2Q80Z38 AL590614.2-201ENSMUST00000225374 1937 ntBASIC21.37■■□□□ 1.01
Shank2Q80Z38 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shank2Q80Z38 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shank2Q80Z38 AC159106.1-201ENSMUST00000224421 690 ntBASIC21.37■■□□□ 1.01
Shank2Q80Z38 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shank2Q80Z38 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shank2Q80Z38 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shank2Q80Z38 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC21.36■■□□□ 1.01
Shank2Q80Z38 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Shank2Q80Z38 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC21.36■■□□□ 1.01
Shank2Q80Z38 Gm13616-201ENSMUST00000120600 222 ntBASIC21.36■■□□□ 1.01
Shank2Q80Z38 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shank2Q80Z38 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shank2Q80Z38 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shank2Q80Z38 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shank2Q80Z38 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC21.36■■□□□ 1.01
Shank2Q80Z38 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shank2Q80Z38 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Shank2Q80Z38 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shank2Q80Z38 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC21.35■■□□□ 1.01
Shank2Q80Z38 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Shank2Q80Z38 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shank2Q80Z38 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Shank2Q80Z38 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Shank2Q80Z38 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shank2Q80Z38 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC21.35■■□□□ 1.01
Shank2Q80Z38 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shank2Q80Z38 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Shank2Q80Z38 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shank2Q80Z38 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shank2Q80Z38 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shank2Q80Z38 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shank2Q80Z38 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shank2Q80Z38 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shank2Q80Z38 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shank2Q80Z38 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Shank2Q80Z38 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shank2Q80Z38 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shank2Q80Z38 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shank2Q80Z38 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shank2Q80Z38 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shank2Q80Z38 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shank2Q80Z38 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shank2Q80Z38 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shank2Q80Z38 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Shank2Q80Z38 AC159295.1-201ENSMUST00000225326 940 ntBASIC21.34■■□□□ 1.01
Shank2Q80Z38 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shank2Q80Z38 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Shank2Q80Z38 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shank2Q80Z38 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Shank2Q80Z38 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Shank2Q80Z38 Gm27646-201ENSMUST00000183989 110 ntBASIC21.33■■□□□ 1.01
Shank2Q80Z38 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC21.33■■□□□ 1.01
Shank2Q80Z38 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC21.33■■□□□ 1.01
Shank2Q80Z38 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Shank2Q80Z38 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Shank2Q80Z38 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.33■■□□□ 1
Shank2Q80Z38 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC21.33■■□□□ 1
Shank2Q80Z38 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Shank2Q80Z38 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Shank2Q80Z38 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC21.33■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms