Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp6nlQ80XC3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Usp6nlQ80XC3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Usp6nlQ80XC3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Usp6nlQ80XC3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 Gm1401-201ENSMUST00000122048 772 ntBASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.32■□□□□ 0.52
Usp6nlQ80XC3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp6nlQ80XC3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp6nlQ80XC3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp6nlQ80XC3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp6nlQ80XC3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.31■□□□□ 0.52
Usp6nlQ80XC3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.31■□□□□ 0.52
Usp6nlQ80XC3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.31■□□□□ 0.52
Usp6nlQ80XC3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Usp6nlQ80XC3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp6nlQ80XC3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp6nlQ80XC3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp6nlQ80XC3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp6nlQ80XC3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp6nlQ80XC3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp6nlQ80XC3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.3■□□□□ 0.52
Usp6nlQ80XC3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp6nlQ80XC3 Mir5131-201ENSMUST00000175426 93 ntBASIC18.3■□□□□ 0.52
Usp6nlQ80XC3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.3■□□□□ 0.52
Usp6nlQ80XC3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp6nlQ80XC3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp6nlQ80XC3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.3■□□□□ 0.52
Usp6nlQ80XC3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Usp6nlQ80XC3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp6nlQ80XC3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp6nlQ80XC3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp6nlQ80XC3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp6nlQ80XC3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp6nlQ80XC3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.3■□□□□ 0.52
Usp6nlQ80XC3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp6nlQ80XC3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp6nlQ80XC3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Usp6nlQ80XC3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp6nlQ80XC3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Usp6nlQ80XC3 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.29■□□□□ 0.52
Usp6nlQ80XC3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp6nlQ80XC3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp6nlQ80XC3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp6nlQ80XC3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Usp6nlQ80XC3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp6nlQ80XC3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp6nlQ80XC3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.29■□□□□ 0.52
Usp6nlQ80XC3 Gm8969-201ENSMUST00000199694 526 ntBASIC18.29■□□□□ 0.52
Usp6nlQ80XC3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp6nlQ80XC3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.29■□□□□ 0.52
Usp6nlQ80XC3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp6nlQ80XC3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp6nlQ80XC3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp6nlQ80XC3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Usp6nlQ80XC3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp6nlQ80XC3 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.29■□□□□ 0.52
Usp6nlQ80XC3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Usp6nlQ80XC3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp6nlQ80XC3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 Gm10060-201ENSMUST00000212002 111 ntBASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms