Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.08■□□□□ 0.48
Sh3tc2Q80VA5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.08■□□□□ 0.48
Sh3tc2Q80VA5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3tc2Q80VA5 Gm18206-201ENSMUST00000207027 926 ntBASIC18.08■□□□□ 0.48
Sh3tc2Q80VA5 Gm18195-201ENSMUST00000207604 706 ntBASIC18.08■□□□□ 0.48
Sh3tc2Q80VA5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3tc2Q80VA5 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3tc2Q80VA5 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.08■□□□□ 0.48
Sh3tc2Q80VA5 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Sh3tc2Q80VA5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3tc2Q80VA5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.08■□□□□ 0.48
Sh3tc2Q80VA5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3tc2Q80VA5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3tc2Q80VA5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3tc2Q80VA5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3tc2Q80VA5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3tc2Q80VA5 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.07■□□□□ 0.48
Sh3tc2Q80VA5 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3tc2Q80VA5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3tc2Q80VA5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3tc2Q80VA5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3tc2Q80VA5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3tc2Q80VA5 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3tc2Q80VA5 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3tc2Q80VA5 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3tc2Q80VA5 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.05■□□□□ 0.48
Sh3tc2Q80VA5 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3tc2Q80VA5 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Sh3tc2Q80VA5 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.05■□□□□ 0.48
Sh3tc2Q80VA5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.05■□□□□ 0.48
Sh3tc2Q80VA5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3tc2Q80VA5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3tc2Q80VA5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3tc2Q80VA5 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3tc2Q80VA5 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.05■□□□□ 0.48
Sh3tc2Q80VA5 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms