Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pcdh19Q80TF3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pcdh19Q80TF3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh19Q80TF3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh19Q80TF3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh19Q80TF3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pcdh19Q80TF3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh19Q80TF3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh19Q80TF3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh19Q80TF3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.32■□□□□ 0.2
Pcdh19Q80TF3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh19Q80TF3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh19Q80TF3 Gm27357-201ENSMUST00000183754 135 ntBASIC16.32■□□□□ 0.2
Pcdh19Q80TF3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.32■□□□□ 0.2
Pcdh19Q80TF3 Gm18421-201ENSMUST00000204122 625 ntBASIC16.32■□□□□ 0.2
Pcdh19Q80TF3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh19Q80TF3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh19Q80TF3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh19Q80TF3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Pcdh19Q80TF3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh19Q80TF3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh19Q80TF3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh19Q80TF3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh19Q80TF3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh19Q80TF3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh19Q80TF3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Gm44450-201ENSMUST00000199528 114 ntBASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdh19Q80TF3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh19Q80TF3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Gm27741-201ENSMUST00000185060 237 ntBASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh19Q80TF3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms