Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh8Q7TSK3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdh8Q7TSK3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh8Q7TSK3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh8Q7TSK3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh8Q7TSK3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh8Q7TSK3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh8Q7TSK3 Gm11336-201ENSMUST00000118168 334 ntBASIC16.41■□□□□ 0.22
Pcdh8Q7TSK3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh8Q7TSK3 Gm27742-201ENSMUST00000184667 60 ntBASIC16.41■□□□□ 0.22
Pcdh8Q7TSK3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.41■□□□□ 0.22
Pcdh8Q7TSK3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh8Q7TSK3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh8Q7TSK3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh8Q7TSK3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh8Q7TSK3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.41■□□□□ 0.22
Pcdh8Q7TSK3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdh8Q7TSK3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh8Q7TSK3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh8Q7TSK3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh8Q7TSK3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Mir3081-201ENSMUST00000175305 84 ntBASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Gm28033-201ENSMUST00000184224 96 ntBASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh8Q7TSK3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.39■□□□□ 0.22
Pcdh8Q7TSK3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh8Q7TSK3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh8Q7TSK3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdh8Q7TSK3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdh8Q7TSK3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh8Q7TSK3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh8Q7TSK3 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.39■□□□□ 0.21
Pcdh8Q7TSK3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdh8Q7TSK3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh8Q7TSK3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh8Q7TSK3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh8Q7TSK3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh8Q7TSK3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh8Q7TSK3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh8Q7TSK3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdh8Q7TSK3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Pcdh8Q7TSK3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdh8Q7TSK3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh8Q7TSK3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Gm17971-201ENSMUST00000190239 806 ntBASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh8Q7TSK3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh8Q7TSK3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh8Q7TSK3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdh8Q7TSK3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh8Q7TSK3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh8Q7TSK3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh8Q7TSK3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdh8Q7TSK3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh8Q7TSK3 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.37■□□□□ 0.21
Pcdh8Q7TSK3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh8Q7TSK3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh8Q7TSK3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh8Q7TSK3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh8Q7TSK3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms