Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubfd1Q78JW9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.19■□□□□ 0.18
Ubfd1Q78JW9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubfd1Q78JW9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubfd1Q78JW9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ubfd1Q78JW9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubfd1Q78JW9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubfd1Q78JW9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubfd1Q78JW9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubfd1Q78JW9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.19■□□□□ 0.18
Ubfd1Q78JW9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.19■□□□□ 0.18
Ubfd1Q78JW9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Ubfd1Q78JW9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.19■□□□□ 0.18
Ubfd1Q78JW9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubfd1Q78JW9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubfd1Q78JW9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubfd1Q78JW9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.19■□□□□ 0.18
Ubfd1Q78JW9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubfd1Q78JW9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubfd1Q78JW9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Ubfd1Q78JW9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ubfd1Q78JW9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubfd1Q78JW9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubfd1Q78JW9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubfd1Q78JW9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.18■□□□□ 0.18
Ubfd1Q78JW9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubfd1Q78JW9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubfd1Q78JW9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.18■□□□□ 0.18
Ubfd1Q78JW9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ubfd1Q78JW9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Ubfd1Q78JW9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubfd1Q78JW9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubfd1Q78JW9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubfd1Q78JW9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ubfd1Q78JW9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubfd1Q78JW9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.18■□□□□ 0.18
Ubfd1Q78JW9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 Gm10052-201ENSMUST00000168019 960 ntBASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 Gm7729-201ENSMUST00000050143 801 ntBASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubfd1Q78JW9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ubfd1Q78JW9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubfd1Q78JW9 Gm7153-201ENSMUST00000117092 455 ntBASIC16.16■□□□□ 0.18
Ubfd1Q78JW9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ubfd1Q78JW9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ubfd1Q78JW9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.16■□□□□ 0.18
Ubfd1Q78JW9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Ubfd1Q78JW9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.16■□□□□ 0.18
Ubfd1Q78JW9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubfd1Q78JW9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubfd1Q78JW9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubfd1Q78JW9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ubfd1Q78JW9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubfd1Q78JW9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ubfd1Q78JW9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubfd1Q78JW9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubfd1Q78JW9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubfd1Q78JW9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.16■□□□□ 0.18
Ubfd1Q78JW9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.16■□□□□ 0.18
Ubfd1Q78JW9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubfd1Q78JW9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubfd1Q78JW9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubfd1Q78JW9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubfd1Q78JW9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ubfd1Q78JW9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubfd1Q78JW9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubfd1Q78JW9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ubfd1Q78JW9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ubfd1Q78JW9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ubfd1Q78JW9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.15■□□□□ 0.18
Ubfd1Q78JW9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ubfd1Q78JW9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms