Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sned1Q70E20 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC20.05■□□□□ 0.8
Sned1Q70E20 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sned1Q70E20 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC20.05■□□□□ 0.8
Sned1Q70E20 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sned1Q70E20 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sned1Q70E20 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sned1Q70E20 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sned1Q70E20 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sned1Q70E20 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sned1Q70E20 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sned1Q70E20 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sned1Q70E20 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Sned1Q70E20 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sned1Q70E20 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sned1Q70E20 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sned1Q70E20 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sned1Q70E20 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sned1Q70E20 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sned1Q70E20 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sned1Q70E20 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sned1Q70E20 AA543401-201ENSMUST00000164248 1269 ntBASIC20.03■□□□□ 0.8
Sned1Q70E20 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sned1Q70E20 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sned1Q70E20 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sned1Q70E20 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sned1Q70E20 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.03■□□□□ 0.8
Sned1Q70E20 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sned1Q70E20 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sned1Q70E20 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sned1Q70E20 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sned1Q70E20 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sned1Q70E20 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sned1Q70E20 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sned1Q70E20 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sned1Q70E20 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Sned1Q70E20 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC20.02■□□□□ 0.8
Sned1Q70E20 Gm17968-201ENSMUST00000194902 784 ntBASIC20.02■□□□□ 0.8
Sned1Q70E20 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC20.02■□□□□ 0.8
Sned1Q70E20 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sned1Q70E20 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sned1Q70E20 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.02■□□□□ 0.8
Sned1Q70E20 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Sned1Q70E20 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Sned1Q70E20 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sned1Q70E20 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sned1Q70E20 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sned1Q70E20 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sned1Q70E20 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sned1Q70E20 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sned1Q70E20 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Sned1Q70E20 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
Sned1Q70E20 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sned1Q70E20 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC20.02■□□□□ 0.79
Sned1Q70E20 Gm2308-201ENSMUST00000166539 1004 ntBASIC20.02■□□□□ 0.79
Sned1Q70E20 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC20.02■□□□□ 0.79
Sned1Q70E20 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC20.02■□□□□ 0.79
Sned1Q70E20 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sned1Q70E20 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Sned1Q70E20 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Sned1Q70E20 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sned1Q70E20 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sned1Q70E20 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sned1Q70E20 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.01■□□□□ 0.79
Sned1Q70E20 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sned1Q70E20 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sned1Q70E20 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sned1Q70E20 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sned1Q70E20 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sned1Q70E20 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sned1Q70E20 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sned1Q70E20 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC20.01■□□□□ 0.79
Sned1Q70E20 Gm4899-201ENSMUST00000178708 719 ntBASIC20.01■□□□□ 0.79
Sned1Q70E20 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC20.01■□□□□ 0.79
Sned1Q70E20 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC20.01■□□□□ 0.79
Sned1Q70E20 AC154572.2-201ENSMUST00000225105 997 ntBASIC20.01■□□□□ 0.79
Sned1Q70E20 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Sned1Q70E20 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sned1Q70E20 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sned1Q70E20 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sned1Q70E20 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sned1Q70E20 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sned1Q70E20 Gm15743-202ENSMUST00000182690 1901 ntBASIC20■□□□□ 0.79
Sned1Q70E20 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sned1Q70E20 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC20■□□□□ 0.79
Sned1Q70E20 Gm13597-201ENSMUST00000121239 375 ntBASIC20■□□□□ 0.79
Sned1Q70E20 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sned1Q70E20 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Sned1Q70E20 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC20■□□□□ 0.79
Sned1Q70E20 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sned1Q70E20 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC20■□□□□ 0.79
Sned1Q70E20 Gm18622-201ENSMUST00000219361 595 ntBASIC20■□□□□ 0.79
Sned1Q70E20 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sned1Q70E20 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sned1Q70E20 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sned1Q70E20 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sned1Q70E20 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sned1Q70E20 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC19.99■□□□□ 0.79
Sned1Q70E20 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Sned1Q70E20 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms