Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.54■□□□□ 0.72
Nup98Q6PFD9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Nup98Q6PFD9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.54■□□□□ 0.72
Nup98Q6PFD9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Nup98Q6PFD9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.54■□□□□ 0.72
Nup98Q6PFD9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup98Q6PFD9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup98Q6PFD9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup98Q6PFD9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Nup98Q6PFD9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Gm43514-201ENSMUST00000198852 424 ntBASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Gm9172-201ENSMUST00000212092 954 ntBASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nup98Q6PFD9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Gm4535-201ENSMUST00000182274 558 ntBASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Gm18206-201ENSMUST00000207027 926 ntBASIC19.53■□□□□ 0.72
Nup98Q6PFD9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Gm10355-201ENSMUST00000097146 517 ntBASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Nup98Q6PFD9 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.52■□□□□ 0.72
Nup98Q6PFD9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup98Q6PFD9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup98Q6PFD9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup98Q6PFD9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Nup98Q6PFD9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup98Q6PFD9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup98Q6PFD9 Gm8097-201ENSMUST00000117903 829 ntBASIC19.52■□□□□ 0.72
Nup98Q6PFD9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup98Q6PFD9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup98Q6PFD9 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.52■□□□□ 0.72
Nup98Q6PFD9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Nup98Q6PFD9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.71
Nup98Q6PFD9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.51■□□□□ 0.71
Nup98Q6PFD9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.51■□□□□ 0.71
Nup98Q6PFD9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.51■□□□□ 0.71
Nup98Q6PFD9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
Nup98Q6PFD9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nup98Q6PFD9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nup98Q6PFD9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nup98Q6PFD9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nup98Q6PFD9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nup98Q6PFD9 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.51■□□□□ 0.71
Nup98Q6PFD9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nup98Q6PFD9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nup98Q6PFD9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nup98Q6PFD9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nup98Q6PFD9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Nup98Q6PFD9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nup98Q6PFD9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nup98Q6PFD9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup98Q6PFD9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.5■□□□□ 0.71
Nup98Q6PFD9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nup98Q6PFD9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Nup98Q6PFD9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup98Q6PFD9 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.49■□□□□ 0.71
Nup98Q6PFD9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup98Q6PFD9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup98Q6PFD9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.49■□□□□ 0.71
Nup98Q6PFD9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup98Q6PFD9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.49■□□□□ 0.71
Nup98Q6PFD9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup98Q6PFD9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nup98Q6PFD9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup98Q6PFD9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup98Q6PFD9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup98Q6PFD9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup98Q6PFD9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup98Q6PFD9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup98Q6PFD9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nup98Q6PFD9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup98Q6PFD9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Nup98Q6PFD9 Gm7862-201ENSMUST00000121461 292 ntBASIC19.48■□□□□ 0.71
Nup98Q6PFD9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup98Q6PFD9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Nup98Q6PFD9 Gm6550-201ENSMUST00000187574 993 ntBASIC19.48■□□□□ 0.71
Nup98Q6PFD9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.48■□□□□ 0.71
Nup98Q6PFD9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.48■□□□□ 0.71
Nup98Q6PFD9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup98Q6PFD9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup98Q6PFD9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup98Q6PFD9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms