Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dhx40Q6PE54 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dhx40Q6PE54 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Dhx40Q6PE54 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dhx40Q6PE54 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dhx40Q6PE54 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
Dhx40Q6PE54 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dhx40Q6PE54 Gm5643-201ENSMUST00000117081 966 ntBASIC18.5■□□□□ 0.55
Dhx40Q6PE54 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.5■□□□□ 0.55
Dhx40Q6PE54 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Dhx40Q6PE54 Gm9731-201ENSMUST00000209480 747 ntBASIC18.5■□□□□ 0.55
Dhx40Q6PE54 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
Dhx40Q6PE54 Gm10812-201ENSMUST00000099864 546 ntBASIC18.5■□□□□ 0.55
Dhx40Q6PE54 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dhx40Q6PE54 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Dhx40Q6PE54 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dhx40Q6PE54 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Dhx40Q6PE54 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Dhx40Q6PE54 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dhx40Q6PE54 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Dhx40Q6PE54 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dhx40Q6PE54 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx40Q6PE54 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx40Q6PE54 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx40Q6PE54 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.49■□□□□ 0.55
Dhx40Q6PE54 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx40Q6PE54 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx40Q6PE54 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx40Q6PE54 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx40Q6PE54 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx40Q6PE54 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx40Q6PE54 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Dhx40Q6PE54 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx40Q6PE54 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dhx40Q6PE54 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Dhx40Q6PE54 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Dhx40Q6PE54 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Dhx40Q6PE54 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Dhx40Q6PE54 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Dhx40Q6PE54 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Dhx40Q6PE54 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.48■□□□□ 0.55
Dhx40Q6PE54 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.48■□□□□ 0.55
Dhx40Q6PE54 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Dhx40Q6PE54 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Dhx40Q6PE54 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Dhx40Q6PE54 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Dhx40Q6PE54 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Dhx40Q6PE54 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Dhx40Q6PE54 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Dhx40Q6PE54 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Dhx40Q6PE54 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Dhx40Q6PE54 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.47■□□□□ 0.55
Dhx40Q6PE54 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Dhx40Q6PE54 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Dhx40Q6PE54 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx40Q6PE54 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx40Q6PE54 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx40Q6PE54 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx40Q6PE54 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx40Q6PE54 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.46■□□□□ 0.55
Dhx40Q6PE54 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Dhx40Q6PE54 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx40Q6PE54 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx40Q6PE54 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx40Q6PE54 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx40Q6PE54 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx40Q6PE54 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Dhx40Q6PE54 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Dhx40Q6PE54 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx40Q6PE54 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dhx40Q6PE54 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Dhx40Q6PE54 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Dhx40Q6PE54 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Dhx40Q6PE54 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Dhx40Q6PE54 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Dhx40Q6PE54 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Dhx40Q6PE54 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Dhx40Q6PE54 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Dhx40Q6PE54 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms