Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm7506-201ENSMUST00000207758 815 ntBASIC14.61□□□□□ -0.07
Snrnp40Q6PE01 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.61□□□□□ -0.07
Snrnp40Q6PE01 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp40Q6PE01 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp40Q6PE01 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp40Q6PE01 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp40Q6PE01 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp40Q6PE01 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Snrnp40Q6PE01 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Snrnp40Q6PE01 Gm10355-201ENSMUST00000097146 517 ntBASIC14.61□□□□□ -0.07
Snrnp40Q6PE01 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp40Q6PE01 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp40Q6PE01 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp40Q6PE01 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp40Q6PE01 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp40Q6PE01 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Snrnp40Q6PE01 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Gm15590-201ENSMUST00000078419 552 ntBASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Snrnp40Q6PE01 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Gm12260-201ENSMUST00000122447 411 ntBASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Gm43575-201ENSMUST00000196420 516 ntBASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp40Q6PE01 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Snrnp40Q6PE01 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Snrnp40Q6PE01 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Snrnp40Q6PE01 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Snrnp40Q6PE01 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Snrnp40Q6PE01 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Snrnp40Q6PE01 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
Snrnp40Q6PE01 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms