Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf220Q6PDX6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf220Q6PDX6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms