Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Smchd1Q6P5D8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smchd1Q6P5D8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Smchd1Q6P5D8 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.22■□□□□ 0.51
Smchd1Q6P5D8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smchd1Q6P5D8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smchd1Q6P5D8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.21■□□□□ 0.51
Smchd1Q6P5D8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smchd1Q6P5D8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Smchd1Q6P5D8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smchd1Q6P5D8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smchd1Q6P5D8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smchd1Q6P5D8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.21■□□□□ 0.51
Smchd1Q6P5D8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smchd1Q6P5D8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smchd1Q6P5D8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.21■□□□□ 0.51
Smchd1Q6P5D8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smchd1Q6P5D8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.21■□□□□ 0.51
Smchd1Q6P5D8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.21■□□□□ 0.51
Smchd1Q6P5D8 Gm43347-201ENSMUST00000200226 580 ntBASIC18.21■□□□□ 0.51
Smchd1Q6P5D8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smchd1Q6P5D8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.21■□□□□ 0.51
Smchd1Q6P5D8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Smchd1Q6P5D8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smchd1Q6P5D8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smchd1Q6P5D8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.2■□□□□ 0.5
Smchd1Q6P5D8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smchd1Q6P5D8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.2■□□□□ 0.5
Smchd1Q6P5D8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.2■□□□□ 0.5
Smchd1Q6P5D8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smchd1Q6P5D8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smchd1Q6P5D8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Smchd1Q6P5D8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smchd1Q6P5D8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smchd1Q6P5D8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smchd1Q6P5D8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smchd1Q6P5D8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smchd1Q6P5D8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.2■□□□□ 0.5
Smchd1Q6P5D8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smchd1Q6P5D8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smchd1Q6P5D8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.2■□□□□ 0.5
Smchd1Q6P5D8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smchd1Q6P5D8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.2■□□□□ 0.5
Smchd1Q6P5D8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smchd1Q6P5D8 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.19■□□□□ 0.5
Smchd1Q6P5D8 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.19■□□□□ 0.5
Smchd1Q6P5D8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smchd1Q6P5D8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smchd1Q6P5D8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.19■□□□□ 0.5
Smchd1Q6P5D8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smchd1Q6P5D8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smchd1Q6P5D8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smchd1Q6P5D8 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.19■□□□□ 0.5
Smchd1Q6P5D8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Smchd1Q6P5D8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smchd1Q6P5D8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smchd1Q6P5D8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smchd1Q6P5D8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smchd1Q6P5D8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Smchd1Q6P5D8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smchd1Q6P5D8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smchd1Q6P5D8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.17■□□□□ 0.5
Smchd1Q6P5D8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smchd1Q6P5D8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smchd1Q6P5D8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.17■□□□□ 0.5
Smchd1Q6P5D8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smchd1Q6P5D8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smchd1Q6P5D8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smchd1Q6P5D8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Smchd1Q6P5D8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Smchd1Q6P5D8 Gm7506-201ENSMUST00000207758 815 ntBASIC18.17■□□□□ 0.5
Smchd1Q6P5D8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Smchd1Q6P5D8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smchd1Q6P5D8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smchd1Q6P5D8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smchd1Q6P5D8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smchd1Q6P5D8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Smchd1Q6P5D8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smchd1Q6P5D8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Smchd1Q6P5D8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms