Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga7Q6DD96 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga7Q6DD96 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga7Q6DD96 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhga7Q6DD96 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga7Q6DD96 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga7Q6DD96 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.15■□□□□ 0.18
Pcdhga7Q6DD96 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhga7Q6DD96 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga7Q6DD96 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga7Q6DD96 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga7Q6DD96 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga7Q6DD96 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga7Q6DD96 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga7Q6DD96 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga7Q6DD96 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga7Q6DD96 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.14■□□□□ 0.17
Pcdhga7Q6DD96 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga7Q6DD96 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga7Q6DD96 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga7Q6DD96 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga7Q6DD96 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhga7Q6DD96 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhga7Q6DD96 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhga7Q6DD96 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.14■□□□□ 0.17
Pcdhga7Q6DD96 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhga7Q6DD96 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdhga7Q6DD96 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga7Q6DD96 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga7Q6DD96 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhga7Q6DD96 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga7Q6DD96 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Pcdhga7Q6DD96 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga7Q6DD96 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga7Q6DD96 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga7Q6DD96 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhga7Q6DD96 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga7Q6DD96 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga7Q6DD96 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdhga7Q6DD96 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga7Q6DD96 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhga7Q6DD96 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga7Q6DD96 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga7Q6DD96 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.13■□□□□ 0.17
Pcdhga7Q6DD96 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga7Q6DD96 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdhga7Q6DD96 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdhga7Q6DD96 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhga7Q6DD96 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhga7Q6DD96 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdhga7Q6DD96 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga7Q6DD96 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhga7Q6DD96 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga7Q6DD96 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga7Q6DD96 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhga7Q6DD96 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga7Q6DD96 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga7Q6DD96 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga7Q6DD96 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga7Q6DD96 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pcdhga7Q6DD96 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.12■□□□□ 0.17
Pcdhga7Q6DD96 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pcdhga7Q6DD96 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.12■□□□□ 0.17
Pcdhga7Q6DD96 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga7Q6DD96 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga7Q6DD96 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga7Q6DD96 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga7Q6DD96 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga7Q6DD96 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga7Q6DD96 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga7Q6DD96 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga7Q6DD96 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga7Q6DD96 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Gm7791-201ENSMUST00000219066 539 ntBASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Timm23-208ENSMUST00000226683 750 ntBASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms