Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scube3Q66PY1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Scube3Q66PY1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.46■□□□□ 0.39
Scube3Q66PY1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Scube3Q66PY1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scube3Q66PY1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Scube3Q66PY1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Scube3Q66PY1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Scube3Q66PY1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scube3Q66PY1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scube3Q66PY1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scube3Q66PY1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scube3Q66PY1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scube3Q66PY1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scube3Q66PY1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scube3Q66PY1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.45■□□□□ 0.38
Scube3Q66PY1 Gm6623-201ENSMUST00000173570 544 ntBASIC17.45■□□□□ 0.38
Scube3Q66PY1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Scube3Q66PY1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scube3Q66PY1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scube3Q66PY1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.45■□□□□ 0.38
Scube3Q66PY1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.45■□□□□ 0.38
Scube3Q66PY1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scube3Q66PY1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scube3Q66PY1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Scube3Q66PY1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scube3Q66PY1 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.45■□□□□ 0.38
Scube3Q66PY1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Scube3Q66PY1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.44■□□□□ 0.38
Scube3Q66PY1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.44■□□□□ 0.38
Scube3Q66PY1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scube3Q66PY1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.44■□□□□ 0.38
Scube3Q66PY1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scube3Q66PY1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.44■□□□□ 0.38
Scube3Q66PY1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scube3Q66PY1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scube3Q66PY1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scube3Q66PY1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scube3Q66PY1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scube3Q66PY1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scube3Q66PY1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scube3Q66PY1 Gm29707-201ENSMUST00000196325 491 ntBASIC17.43■□□□□ 0.38
Scube3Q66PY1 Gm17808-201ENSMUST00000200859 894 ntBASIC17.43■□□□□ 0.38
Scube3Q66PY1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scube3Q66PY1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Scube3Q66PY1 Gm7367-201ENSMUST00000057611 492 ntBASIC17.43■□□□□ 0.38
Scube3Q66PY1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scube3Q66PY1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scube3Q66PY1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scube3Q66PY1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scube3Q66PY1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Scube3Q66PY1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Scube3Q66PY1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scube3Q66PY1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scube3Q66PY1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scube3Q66PY1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scube3Q66PY1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scube3Q66PY1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scube3Q66PY1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scube3Q66PY1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scube3Q66PY1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.42■□□□□ 0.38
Scube3Q66PY1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.42■□□□□ 0.38
Scube3Q66PY1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scube3Q66PY1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.42■□□□□ 0.38
Scube3Q66PY1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scube3Q66PY1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scube3Q66PY1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scube3Q66PY1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Scube3Q66PY1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scube3Q66PY1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scube3Q66PY1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scube3Q66PY1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scube3Q66PY1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scube3Q66PY1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scube3Q66PY1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scube3Q66PY1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.41■□□□□ 0.38
Scube3Q66PY1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.41■□□□□ 0.38
Scube3Q66PY1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.41■□□□□ 0.38
Scube3Q66PY1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scube3Q66PY1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms