Protein–RNA interactions for Protein: Q62442

Vamp1, Vesicle-associated membrane protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1Q62442 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp1Q62442 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp1Q62442 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.29□□□□□ -0.12
Vamp1Q62442 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp1Q62442 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp1Q62442 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp1Q62442 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Vamp1Q62442 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp1Q62442 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp1Q62442 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vamp1Q62442 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vamp1Q62442 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.29□□□□□ -0.12
Vamp1Q62442 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp1Q62442 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vamp1Q62442 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp1Q62442 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp1Q62442 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vamp1Q62442 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp1Q62442 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp1Q62442 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp1Q62442 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp1Q62442 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp1Q62442 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vamp1Q62442 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp1Q62442 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp1Q62442 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp1Q62442 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp1Q62442 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Vamp1Q62442 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp1Q62442 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp1Q62442 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp1Q62442 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp1Q62442 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp1Q62442 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.28□□□□□ -0.12
Vamp1Q62442 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp1Q62442 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp1Q62442 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp1Q62442 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp1Q62442 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp1Q62442 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp1Q62442 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Vamp1Q62442 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp1Q62442 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp1Q62442 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Vamp1Q62442 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Vamp1Q62442 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp1Q62442 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Vamp1Q62442 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp1Q62442 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp1Q62442 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp1Q62442 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.27□□□□□ -0.12
Vamp1Q62442 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp1Q62442 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Vamp1Q62442 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp1Q62442 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp1Q62442 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Vamp1Q62442 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Vamp1Q62442 Gm13401-201ENSMUST00000117074 291 ntBASIC14.27□□□□□ -0.13
Vamp1Q62442 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Vamp1Q62442 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.27□□□□□ -0.13
Vamp1Q62442 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Vamp1Q62442 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vamp1Q62442 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vamp1Q62442 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vamp1Q62442 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vamp1Q62442 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vamp1Q62442 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vamp1Q62442 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Vamp1Q62442 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vamp1Q62442 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vamp1Q62442 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vamp1Q62442 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vamp1Q62442 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp1Q62442 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.26□□□□□ -0.13
Vamp1Q62442 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp1Q62442 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Vamp1Q62442 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp1Q62442 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp1Q62442 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.26□□□□□ -0.13
Vamp1Q62442 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp1Q62442 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp1Q62442 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.26□□□□□ -0.13
Vamp1Q62442 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Vamp1Q62442 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp1Q62442 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.26□□□□□ -0.13
Vamp1Q62442 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp1Q62442 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Vamp1Q62442 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp1Q62442 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp1Q62442 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms