Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AtmQ62388 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AtmQ62388 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AtmQ62388 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.68■□□□□ 0.1
AtmQ62388 Mir8117-201ENSMUST00000184773 107 ntBASIC15.68■□□□□ 0.1
AtmQ62388 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
AtmQ62388 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AtmQ62388 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AtmQ62388 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AtmQ62388 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
AtmQ62388 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
AtmQ62388 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
AtmQ62388 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AtmQ62388 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AtmQ62388 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AtmQ62388 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AtmQ62388 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.67■□□□□ 0.1
AtmQ62388 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
AtmQ62388 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AtmQ62388 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.67■□□□□ 0.1
AtmQ62388 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AtmQ62388 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
AtmQ62388 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AtmQ62388 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AtmQ62388 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.67■□□□□ 0.1
AtmQ62388 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AtmQ62388 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AtmQ62388 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AtmQ62388 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.67■□□□□ 0.1
AtmQ62388 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.67■□□□□ 0.1
AtmQ62388 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.67■□□□□ 0.1
AtmQ62388 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AtmQ62388 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
AtmQ62388 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AtmQ62388 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.67■□□□□ 0.1
AtmQ62388 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AtmQ62388 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.67■□□□□ 0.1
AtmQ62388 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AtmQ62388 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AtmQ62388 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.66■□□□□ 0.1
AtmQ62388 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.66■□□□□ 0.1
AtmQ62388 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
AtmQ62388 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AtmQ62388 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
AtmQ62388 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
AtmQ62388 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.66■□□□□ 0.1
AtmQ62388 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.66■□□□□ 0.1
AtmQ62388 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
AtmQ62388 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AtmQ62388 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.66■□□□□ 0.1
AtmQ62388 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
AtmQ62388 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
AtmQ62388 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.66■□□□□ 0.1
AtmQ62388 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AtmQ62388 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
AtmQ62388 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AtmQ62388 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AtmQ62388 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AtmQ62388 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AtmQ62388 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.66■□□□□ 0.1
AtmQ62388 Mir6977-201ENSMUST00000184960 64 ntBASIC15.66■□□□□ 0.1
AtmQ62388 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AtmQ62388 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AtmQ62388 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
AtmQ62388 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
AtmQ62388 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
AtmQ62388 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.66■□□□□ 0.1
AtmQ62388 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
AtmQ62388 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.65■□□□□ 0.1
AtmQ62388 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AtmQ62388 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
AtmQ62388 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AtmQ62388 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.65■□□□□ 0.1
AtmQ62388 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.65■□□□□ 0.1
AtmQ62388 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AtmQ62388 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
AtmQ62388 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AtmQ62388 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
AtmQ62388 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AtmQ62388 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AtmQ62388 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
AtmQ62388 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AtmQ62388 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.64■□□□□ 0.09
AtmQ62388 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.64■□□□□ 0.09
AtmQ62388 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
AtmQ62388 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AtmQ62388 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
AtmQ62388 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AtmQ62388 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AtmQ62388 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.64■□□□□ 0.09
AtmQ62388 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AtmQ62388 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AtmQ62388 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AtmQ62388 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
AtmQ62388 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
AtmQ62388 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.64■□□□□ 0.09
AtmQ62388 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.64■□□□□ 0.09
AtmQ62388 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AtmQ62388 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AtmQ62388 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms