Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Six3Q62233 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Six3Q62233 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Six3Q62233 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six3Q62233 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six3Q62233 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six3Q62233 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Six3Q62233 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Six3Q62233 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Six3Q62233 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Six3Q62233 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Six3Q62233 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Six3Q62233 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Six3Q62233 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Six3Q62233 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Six3Q62233 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six3Q62233 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Six3Q62233 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six3Q62233 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six3Q62233 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six3Q62233 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Six3Q62233 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six3Q62233 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.26■□□□□ 0.19
Six3Q62233 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.26■□□□□ 0.19
Six3Q62233 Gm22240-201ENSMUST00000175225 82 ntBASIC16.26■□□□□ 0.19
Six3Q62233 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six3Q62233 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six3Q62233 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Six3Q62233 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six3Q62233 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six3Q62233 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Six3Q62233 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six3Q62233 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Six3Q62233 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six3Q62233 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.26■□□□□ 0.19
Six3Q62233 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six3Q62233 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Six3Q62233 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.26■□□□□ 0.19
Six3Q62233 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Six3Q62233 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six3Q62233 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.26■□□□□ 0.19
Six3Q62233 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Six3Q62233 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six3Q62233 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Six3Q62233 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six3Q62233 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Six3Q62233 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six3Q62233 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Six3Q62233 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Six3Q62233 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six3Q62233 Mir5122-201ENSMUST00000175004 89 ntBASIC16.25■□□□□ 0.19
Six3Q62233 Gm21814-202ENSMUST00000203277 873 ntBASIC16.25■□□□□ 0.19
Six3Q62233 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six3Q62233 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Six3Q62233 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Six3Q62233 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Six3Q62233 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six3Q62233 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six3Q62233 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six3Q62233 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Six3Q62233 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Six3Q62233 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six3Q62233 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Six3Q62233 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.24■□□□□ 0.19
Six3Q62233 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Six3Q62233 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six3Q62233 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.24■□□□□ 0.19
Six3Q62233 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six3Q62233 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Six3Q62233 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Six3Q62233 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Six3Q62233 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.24■□□□□ 0.19
Six3Q62233 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six3Q62233 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Six3Q62233 Gm10812-201ENSMUST00000099864 546 ntBASIC16.24■□□□□ 0.19
Six3Q62233 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six3Q62233 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Six3Q62233 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six3Q62233 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Six3Q62233 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Six3Q62233 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six3Q62233 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.23■□□□□ 0.19
Six3Q62233 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Six3Q62233 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six3Q62233 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
Six3Q62233 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.23■□□□□ 0.19
Six3Q62233 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six3Q62233 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Six3Q62233 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six3Q62233 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six3Q62233 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Six3Q62233 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six3Q62233 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.23■□□□□ 0.19
Six3Q62233 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six3Q62233 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Six3Q62233 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six3Q62233 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six3Q62233 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six3Q62233 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six3Q62233 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms