Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six1Q62231 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six1Q62231 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.06■□□□□ 0.32
Six1Q62231 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six1Q62231 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six1Q62231 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six1Q62231 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Six1Q62231 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Six1Q62231 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six1Q62231 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six1Q62231 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Six1Q62231 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six1Q62231 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six1Q62231 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six1Q62231 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.05■□□□□ 0.32
Six1Q62231 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six1Q62231 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Six1Q62231 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Six1Q62231 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six1Q62231 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six1Q62231 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Six1Q62231 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six1Q62231 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six1Q62231 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six1Q62231 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Six1Q62231 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six1Q62231 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.05■□□□□ 0.32
Six1Q62231 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six1Q62231 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Six1Q62231 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.04■□□□□ 0.32
Six1Q62231 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six1Q62231 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six1Q62231 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Six1Q62231 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.04■□□□□ 0.32
Six1Q62231 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.04■□□□□ 0.32
Six1Q62231 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six1Q62231 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six1Q62231 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Six1Q62231 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Six1Q62231 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six1Q62231 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Six1Q62231 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.04■□□□□ 0.32
Six1Q62231 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six1Q62231 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six1Q62231 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Six1Q62231 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six1Q62231 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Six1Q62231 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six1Q62231 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Six1Q62231 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six1Q62231 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Six1Q62231 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.03■□□□□ 0.32
Six1Q62231 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.03■□□□□ 0.32
Six1Q62231 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Six1Q62231 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Six1Q62231 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.03■□□□□ 0.32
Six1Q62231 Mir5122-201ENSMUST00000175004 89 ntBASIC17.03■□□□□ 0.32
Six1Q62231 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.03■□□□□ 0.32
Six1Q62231 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Six1Q62231 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six1Q62231 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six1Q62231 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six1Q62231 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six1Q62231 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Six1Q62231 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six1Q62231 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six1Q62231 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Six1Q62231 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six1Q62231 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six1Q62231 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six1Q62231 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.02■□□□□ 0.32
Six1Q62231 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six1Q62231 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Six1Q62231 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.02■□□□□ 0.32
Six1Q62231 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.02■□□□□ 0.32
Six1Q62231 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Six1Q62231 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.02■□□□□ 0.32
Six1Q62231 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.02■□□□□ 0.32
Six1Q62231 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six1Q62231 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
Six1Q62231 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Six1Q62231 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Six1Q62231 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Six1Q62231 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Six1Q62231 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.02■□□□□ 0.31
Six1Q62231 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Six1Q62231 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.31
Six1Q62231 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.01■□□□□ 0.31
Six1Q62231 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Six1Q62231 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.01■□□□□ 0.31
Six1Q62231 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.01■□□□□ 0.31
Six1Q62231 Gm44450-201ENSMUST00000199528 114 ntBASIC17.01■□□□□ 0.31
Six1Q62231 Gm7370-201ENSMUST00000219471 767 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms