Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim27Q62158 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim27Q62158 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim27Q62158 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim27Q62158 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim27Q62158 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim27Q62158 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim27Q62158 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim27Q62158 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim27Q62158 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim27Q62158 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Trim27Q62158 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim27Q62158 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim27Q62158 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim27Q62158 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim27Q62158 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trim27Q62158 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim27Q62158 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.44■□□□□ 0.86
Trim27Q62158 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim27Q62158 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trim27Q62158 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trim27Q62158 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trim27Q62158 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trim27Q62158 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trim27Q62158 Gm10231-201ENSMUST00000181584 441 ntBASIC20.44■□□□□ 0.86
Trim27Q62158 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim27Q62158 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trim27Q62158 Gm10175-202ENSMUST00000208752 441 ntBASIC20.44■□□□□ 0.86
Trim27Q62158 Gm21559-201ENSMUST00000220638 855 ntBASIC20.44■□□□□ 0.86
Trim27Q62158 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim27Q62158 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim27Q62158 Gm8587-201ENSMUST00000076538 843 ntBASIC20.44■□□□□ 0.86
Trim27Q62158 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim27Q62158 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim27Q62158 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim27Q62158 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim27Q62158 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim27Q62158 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim27Q62158 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim27Q62158 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.43■□□□□ 0.86
Trim27Q62158 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim27Q62158 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Trim27Q62158 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Trim27Q62158 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim27Q62158 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim27Q62158 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim27Q62158 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim27Q62158 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim27Q62158 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.43■□□□□ 0.86
Trim27Q62158 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim27Q62158 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.42■□□□□ 0.86
Trim27Q62158 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim27Q62158 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.42■□□□□ 0.86
Trim27Q62158 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim27Q62158 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim27Q62158 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.42■□□□□ 0.86
Trim27Q62158 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.42■□□□□ 0.86
Trim27Q62158 Gm22697-201ENSMUST00000175194 63 ntBASIC20.42■□□□□ 0.86
Trim27Q62158 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim27Q62158 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim27Q62158 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim27Q62158 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Trim27Q62158 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim27Q62158 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim27Q62158 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim27Q62158 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim27Q62158 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim27Q62158 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim27Q62158 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC20.42■□□□□ 0.86
Trim27Q62158 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim27Q62158 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim27Q62158 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim27Q62158 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim27Q62158 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Trim27Q62158 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Trim27Q62158 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim27Q62158 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Trim27Q62158 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trim27Q62158 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim27Q62158 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim27Q62158 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Trim27Q62158 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.41■□□□□ 0.86
Trim27Q62158 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim27Q62158 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim27Q62158 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim27Q62158 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim27Q62158 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim27Q62158 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim27Q62158 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Trim27Q62158 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim27Q62158 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim27Q62158 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Trim27Q62158 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim27Q62158 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim27Q62158 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Trim27Q62158 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim27Q62158 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim27Q62158 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.4■□□□□ 0.86
Trim27Q62158 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim27Q62158 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms