Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ift88Q61371 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.43■□□□□ 0.54
Ift88Q61371 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ift88Q61371 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ift88Q61371 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ift88Q61371 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ift88Q61371 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ift88Q61371 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ift88Q61371 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ift88Q61371 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ift88Q61371 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ift88Q61371 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ift88Q61371 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ift88Q61371 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ift88Q61371 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ift88Q61371 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ift88Q61371 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.43■□□□□ 0.54
Ift88Q61371 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.43■□□□□ 0.54
Ift88Q61371 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.43■□□□□ 0.54
Ift88Q61371 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.43■□□□□ 0.54
Ift88Q61371 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
Ift88Q61371 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Ift88Q61371 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ift88Q61371 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.43■□□□□ 0.54
Ift88Q61371 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ift88Q61371 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ift88Q61371 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ift88Q61371 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.42■□□□□ 0.54
Ift88Q61371 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ift88Q61371 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ift88Q61371 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ift88Q61371 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ift88Q61371 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ift88Q61371 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ift88Q61371 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ift88Q61371 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.42■□□□□ 0.54
Ift88Q61371 Gm38027-201ENSMUST00000192315 235 ntBASIC18.42■□□□□ 0.54
Ift88Q61371 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ift88Q61371 Il3ra-202ENSMUST00000223589 738 ntBASIC18.42■□□□□ 0.54
Ift88Q61371 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ift88Q61371 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ift88Q61371 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ift88Q61371 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ift88Q61371 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ift88Q61371 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ift88Q61371 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ift88Q61371 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ift88Q61371 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.41■□□□□ 0.54
Ift88Q61371 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ift88Q61371 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Ift88Q61371 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ift88Q61371 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ift88Q61371 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ift88Q61371 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.41■□□□□ 0.54
Ift88Q61371 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.41■□□□□ 0.54
Ift88Q61371 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ift88Q61371 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ift88Q61371 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.41■□□□□ 0.54
Ift88Q61371 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ift88Q61371 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ift88Q61371 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ift88Q61371 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ift88Q61371 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ift88Q61371 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ift88Q61371 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ift88Q61371 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ift88Q61371 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.4■□□□□ 0.54
Ift88Q61371 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.4■□□□□ 0.54
Ift88Q61371 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Ift88Q61371 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ift88Q61371 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.4■□□□□ 0.54
Ift88Q61371 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ift88Q61371 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ift88Q61371 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ift88Q61371 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ift88Q61371 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Ift88Q61371 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ift88Q61371 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ift88Q61371 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ift88Q61371 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ift88Q61371 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ift88Q61371 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Ift88Q61371 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ift88Q61371 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ift88Q61371 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ift88Q61371 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ift88Q61371 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.39■□□□□ 0.53
Ift88Q61371 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.39■□□□□ 0.53
Ift88Q61371 Gm18958-201ENSMUST00000174258 762 ntBASIC18.39■□□□□ 0.53
Ift88Q61371 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.39■□□□□ 0.53
Ift88Q61371 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ift88Q61371 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ift88Q61371 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Ift88Q61371 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ift88Q61371 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ift88Q61371 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ift88Q61371 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ift88Q61371 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ift88Q61371 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ift88Q61371 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms