Protein–RNA interactions for Protein: Q61136

Prpf4b, Serine/threonine-protein kinase PRP4 homolog, mousemouse

Known RBP Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4bQ61136 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Prpf4bQ61136 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Prpf4bQ61136 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf4bQ61136 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf4bQ61136 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.06■□□□□ 0.64
Prpf4bQ61136 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf4bQ61136 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.06■□□□□ 0.64
Prpf4bQ61136 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf4bQ61136 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.06■□□□□ 0.64
Prpf4bQ61136 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf4bQ61136 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf4bQ61136 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf4bQ61136 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf4bQ61136 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf4bQ61136 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf4bQ61136 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf4bQ61136 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf4bQ61136 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf4bQ61136 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Prpf4bQ61136 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Prpf4bQ61136 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf4bQ61136 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf4bQ61136 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf4bQ61136 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.05■□□□□ 0.64
Prpf4bQ61136 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf4bQ61136 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf4bQ61136 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf4bQ61136 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf4bQ61136 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf4bQ61136 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf4bQ61136 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf4bQ61136 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf4bQ61136 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf4bQ61136 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf4bQ61136 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.04■□□□□ 0.64
Prpf4bQ61136 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf4bQ61136 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf4bQ61136 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.04■□□□□ 0.64
Prpf4bQ61136 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.04■□□□□ 0.64
Prpf4bQ61136 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.04■□□□□ 0.64
Prpf4bQ61136 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.04■□□□□ 0.64
Prpf4bQ61136 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf4bQ61136 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf4bQ61136 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf4bQ61136 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf4bQ61136 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf4bQ61136 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf4bQ61136 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf4bQ61136 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf4bQ61136 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.04■□□□□ 0.64
Prpf4bQ61136 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Prpf4bQ61136 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Prpf4bQ61136 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf4bQ61136 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.04■□□□□ 0.64
Prpf4bQ61136 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf4bQ61136 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Prpf4bQ61136 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.03■□□□□ 0.64
Prpf4bQ61136 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf4bQ61136 Gm18958-201ENSMUST00000174258 762 ntBASIC19.03■□□□□ 0.64
Prpf4bQ61136 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.03■□□□□ 0.64
Prpf4bQ61136 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf4bQ61136 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf4bQ61136 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf4bQ61136 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf4bQ61136 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf4bQ61136 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf4bQ61136 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.03■□□□□ 0.64
Prpf4bQ61136 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Prpf4bQ61136 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf4bQ61136 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf4bQ61136 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf4bQ61136 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.02■□□□□ 0.64
Prpf4bQ61136 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf4bQ61136 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf4bQ61136 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf4bQ61136 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf4bQ61136 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf4bQ61136 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf4bQ61136 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Prpf4bQ61136 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf4bQ61136 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf4bQ61136 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Prpf4bQ61136 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf4bQ61136 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf4bQ61136 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.02■□□□□ 0.64
Prpf4bQ61136 Il3ra-202ENSMUST00000223589 738 ntBASIC19.02■□□□□ 0.64
Prpf4bQ61136 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf4bQ61136 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf4bQ61136 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf4bQ61136 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Prpf4bQ61136 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Prpf4bQ61136 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf4bQ61136 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf4bQ61136 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf4bQ61136 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.01■□□□□ 0.63
Prpf4bQ61136 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Prpf4bQ61136 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf4bQ61136 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.01■□□□□ 0.63
Prpf4bQ61136 Gm43799-201ENSMUST00000201845 579 ntBASIC19.01■□□□□ 0.63
Prpf4bQ61136 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms