Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cln3Q61124 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cln3Q61124 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.2■□□□□ 0.5
Cln3Q61124 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cln3Q61124 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cln3Q61124 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cln3Q61124 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.19■□□□□ 0.5
Cln3Q61124 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cln3Q61124 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cln3Q61124 Gm25990-201ENSMUST00000102440 86 ntBASIC18.19■□□□□ 0.5
Cln3Q61124 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cln3Q61124 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cln3Q61124 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cln3Q61124 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.19■□□□□ 0.5
Cln3Q61124 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cln3Q61124 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.19■□□□□ 0.5
Cln3Q61124 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.19■□□□□ 0.5
Cln3Q61124 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.19■□□□□ 0.5
Cln3Q61124 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cln3Q61124 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Cln3Q61124 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cln3Q61124 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cln3Q61124 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cln3Q61124 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cln3Q61124 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Cln3Q61124 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cln3Q61124 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cln3Q61124 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cln3Q61124 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cln3Q61124 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cln3Q61124 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.18■□□□□ 0.5
Cln3Q61124 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cln3Q61124 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cln3Q61124 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.18■□□□□ 0.5
Cln3Q61124 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cln3Q61124 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cln3Q61124 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cln3Q61124 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cln3Q61124 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.18■□□□□ 0.5
Cln3Q61124 Gm11594-201ENSMUST00000122313 162 ntBASIC18.18■□□□□ 0.5
Cln3Q61124 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cln3Q61124 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cln3Q61124 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cln3Q61124 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Cln3Q61124 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.18■□□□□ 0.5
Cln3Q61124 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cln3Q61124 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cln3Q61124 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cln3Q61124 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cln3Q61124 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cln3Q61124 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cln3Q61124 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cln3Q61124 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cln3Q61124 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Cln3Q61124 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.17■□□□□ 0.5
Cln3Q61124 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.17■□□□□ 0.5
Cln3Q61124 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cln3Q61124 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cln3Q61124 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cln3Q61124 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cln3Q61124 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cln3Q61124 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cln3Q61124 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.16■□□□□ 0.5
Cln3Q61124 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cln3Q61124 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cln3Q61124 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.16■□□□□ 0.5
Cln3Q61124 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Cln3Q61124 Gm4535-201ENSMUST00000182274 558 ntBASIC18.16■□□□□ 0.5
Cln3Q61124 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.16■□□□□ 0.5
Cln3Q61124 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.16■□□□□ 0.5
Cln3Q61124 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.16■□□□□ 0.5
Cln3Q61124 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cln3Q61124 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cln3Q61124 Gm10355-201ENSMUST00000097146 517 ntBASIC18.16■□□□□ 0.5
Cln3Q61124 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cln3Q61124 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cln3Q61124 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cln3Q61124 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Cln3Q61124 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cln3Q61124 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.15■□□□□ 0.5
Cln3Q61124 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cln3Q61124 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cln3Q61124 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cln3Q61124 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.15■□□□□ 0.5
Cln3Q61124 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.15■□□□□ 0.5
Cln3Q61124 Gm11779-201ENSMUST00000118541 368 ntBASIC18.15■□□□□ 0.5
Cln3Q61124 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.15■□□□□ 0.5
Cln3Q61124 Gm8000-201ENSMUST00000188378 592 ntBASIC18.15■□□□□ 0.5
Cln3Q61124 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.15■□□□□ 0.5
Cln3Q61124 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.15■□□□□ 0.5
Cln3Q61124 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cln3Q61124 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cln3Q61124 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cln3Q61124 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cln3Q61124 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cln3Q61124 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cln3Q61124 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cln3Q61124 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cln3Q61124 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.14■□□□□ 0.49
Cln3Q61124 Gm15173-201ENSMUST00000122049 433 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms