Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Prdm1Q60636 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Prdm1Q60636 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prdm1Q60636 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Prdm1Q60636 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prdm1Q60636 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prdm1Q60636 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Prdm1Q60636 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prdm1Q60636 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prdm1Q60636 Gm18421-201ENSMUST00000204122 625 ntBASIC19.43■□□□□ 0.7
Prdm1Q60636 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prdm1Q60636 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prdm1Q60636 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Prdm1Q60636 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Prdm1Q60636 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prdm1Q60636 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prdm1Q60636 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prdm1Q60636 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prdm1Q60636 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prdm1Q60636 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prdm1Q60636 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm1Q60636 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm1Q60636 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm1Q60636 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm1Q60636 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.42■□□□□ 0.7
Prdm1Q60636 Mir770-201ENSMUST00000103252 94 ntBASIC19.42■□□□□ 0.7
Prdm1Q60636 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm1Q60636 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.42■□□□□ 0.7
Prdm1Q60636 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm1Q60636 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.42■□□□□ 0.7
Prdm1Q60636 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm1Q60636 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm1Q60636 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm1Q60636 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm1Q60636 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm1Q60636 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm1Q60636 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm1Q60636 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Prdm1Q60636 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Prdm1Q60636 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm1Q60636 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.41■□□□□ 0.7
Prdm1Q60636 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm1Q60636 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Prdm1Q60636 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.41■□□□□ 0.7
Prdm1Q60636 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Prdm1Q60636 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.41■□□□□ 0.7
Prdm1Q60636 Gm5587-201ENSMUST00000206270 674 ntBASIC19.41■□□□□ 0.7
Prdm1Q60636 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm1Q60636 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm1Q60636 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm1Q60636 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm1Q60636 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm1Q60636 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm1Q60636 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm1Q60636 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm1Q60636 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.4■□□□□ 0.7
Prdm1Q60636 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm1Q60636 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm1Q60636 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm1Q60636 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm1Q60636 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Prdm1Q60636 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm1Q60636 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.4■□□□□ 0.7
Prdm1Q60636 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.4■□□□□ 0.7
Prdm1Q60636 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm1Q60636 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm1Q60636 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.4■□□□□ 0.7
Prdm1Q60636 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm1Q60636 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Prdm1Q60636 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm1Q60636 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm1Q60636 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm1Q60636 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.4■□□□□ 0.7
Prdm1Q60636 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm1Q60636 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Prdm1Q60636 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm1Q60636 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prdm1Q60636 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.39■□□□□ 0.7
Prdm1Q60636 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.39■□□□□ 0.7
Prdm1Q60636 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Prdm1Q60636 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prdm1Q60636 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm1Q60636 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Prdm1Q60636 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.39■□□□□ 0.69
Prdm1Q60636 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.39■□□□□ 0.69
Prdm1Q60636 Gm9013-201ENSMUST00000132939 882 ntBASIC19.39■□□□□ 0.69
Prdm1Q60636 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.39■□□□□ 0.69
Prdm1Q60636 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm1Q60636 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm1Q60636 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm1Q60636 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm1Q60636 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.39■□□□□ 0.69
Prdm1Q60636 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.39■□□□□ 0.69
Prdm1Q60636 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm1Q60636 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Prdm1Q60636 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Prdm1Q60636 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm1Q60636 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm1Q60636 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm1Q60636 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms